Input sequence

Protein name DNA-directed RNA polymerase I subunit RPA1
Organism Mus musculus Length 1717
Disorder content 6.2% ProS content 2.3%
IDEAL NA UniProt O35134

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil 0 1717 1-5 6-151 152-156 157-230 231-253 254-257 258-291 292-297 298-351 352-357 358-379 380-413 414-420 421-533 534-537 538-986 987-991 992-1404 1405-1416 1417-1454 1455-1494 1495-1717 6-151 157-230 258-291 298-351 380-413 421-533 538-986 992-1404 1417-1454 1495-1717 1-5 152-156 231-253 358-379 1405-1416 1455-1494 152-156 231-253 364-371 378-379 1415-1416 12-1367 1498-1695 10-1382 1483-1716 441-618 626-809 15-139 1210-1273 965-1039 898-957 9-439 441-621 624-809 853-958 965-1669 296-1056 1493-1712 8-110 1189-1275 6-1712 1075-1086 1194-1205 1279-1292 1388-1405 1409-1421 1425-1452 1462-1477 1698-1708 1377-1404 1417-1454 4c2mA(11-1249) 0.0 38.7% 4c2mA(1303-1496) 5e-30 35.86% 4c2mA(9-1264) 0.0 37.44% 4c2mA(1288-1517) 6e-50 34.19% PF00623(1-163) 8e-41 49.44% PF04983(3-145) 1e-21 36.96% PF04997(5-127) 3e-19 39.2% PF04998(142-204) 2e-15 62.5% PF04998(1-75) 9e-13 45.33% PF05000(47-106) 1e-08 41.67% PF04997 7e-07 -84.9% PF00623 4.3e-105 359.7% PF04983 2.5e-62 217.7% PF05000 1.7e-27 101.9% PF04998 1.5e-158 537.3% 1i3qA(225-894) 8e-175 29.95% 1i3qA(1189-1412) 2e-36 23.58% 1i3qA(9-112) 5e-30 33.65% 1i3qA(1034-1109) 4e-17 44.83% e.29.1 0.0 1270.5%

Sequence

MLASKHTPWRRLQGISFGMYSAEELKKLSVKSITNPRYVDYLGNPSANGLYDLALGPADS
KEVCATCVQDFNNCSGHLGHIDLPLTVYNPFLFDKLYLLLRGSCLSCHMLTCPRAAIYLL
ISQLRVLEVGALQAVYELERILSRFLEETGDPSAFEIQEELEEYTSKILQNNLLGSQGTH
VKNVCESRSKLVAQFWKTHMAAKQCPHCKTGRSVVRKEHNSKLIITYPATVHKKSDQEGT
ELPEGVPEAPGIDKAQMGKRGYLTPSSAQEHLFAIWKNEGFFLNYLFSGLDDIGPESSFN
PSMFFLDFIVVPPSRYRPVNRLGDQMFTNGQTVNLQAVMKDAVLIRKLLALMAQEQKLPC
EMTELTIDKENDSSVAIDRSFLGLLPGPSLTDKLYNIWIRLQSHVNIVFDSEMDKLMLEK
YPGIRQILEKKEGLFRKHMMGKRVDYAARSVICPDMYINTNEIGIPMVFATKLTYPQPVT
PWNVQELRQAVINGPNVHPGASMVINEDGSRTALSSVDAAQREAVAKQLLTPATGAPKPQ
GTKVVCRHVKNGDILLLNRQPTLHRPSIQAHRARILPEEKVLRLHYANCKAYNADFDGDE
MNAHFPQSELGRAEAYVLACTDQQYLVPKDGQPLAGLIQDHMVSGANMTIRGCFFTREQY
MELVYRGLTDKVGRVKLFPPAILKPFPLWTGKQVVSTLLINIIPEDYAPLNLSGKAKIGS
KAWVKEKPRPIPDFDPDSMCESQVIIREGELLCGVLDKAHYGSSAYGLVHCCYEIYGGET
SGRVLTCLARLFTAYLQLYRGFTLGVEDILVKPNADVVRQRIIEESTQCGPQAVKAALSL
PETASCDEIQGKWQDAHLSKDQRDFNMIDMKFKEEVNHYSNEINKACMPLGLHRQFPENN
LQMMVQSGAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFEPYEFTPRAGGFVTG
RFLTGIRPPEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVIQYDLTVRDSDGS
VVQFLYGEDGLDIPKTQFLQPKQFPFLAGNYEVIMKSKHLHEVLSRADPQKVLGHIKAIK
KWHHKHSGALLRKGAFLSFSQKIQAAVKALNLKGSIQNGRSPETQQMLQMWYDLDEESRW
KYQKRAAPCPDPSLSVWRPDIYFASVSETFEKKIDDFSQEWAAQAERSYKKSELSLDRLR
TLLQLKWQRSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILM
VASANIKTPMMSVPVFDTKKALKKVKSLKKRLTRVCLGEVLQKVDIQESFCMGEKRNKFQ
VYELRFQFLPHAYYQQEKCLRPEDILHFMETRFFKLLMEAIKKKKNKASAFRNVNSRRAT
QKDLNDTEDSGRSQREEERDEEEEGNIVDAEAEEGDADASDTKRKEKQEEEVDYESEEEG
EEEEEEEVQEEGNIKGDGVHQGHEPDEEEHLGLEEEESSQKPPRRHSRPQGAEAIKRRIQ
AVRESYSFIEDYQYDTEESLWCQVTVKLPLMKINFDMSSLVVSLAHKAIVYTTKGITRCL
LNETTNSKNEKELVLNTEGINLPELFKYSEILDLRRLYSNDIHAMANTYGIEAALRVIEK
EIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFGIQSSSSPLQQMTFETSFQFLKQ
ATMMGSHDELKSPSACLVVGKVVKGGTGLFELKQPLR

Region:1-1717
Length:1717aa
Label:Full sequence
Reset:click