Input sequence

Protein name RNA polymerase sigma factor sigA
Organism Arabidopsis thaliana Length 502
Disorder content 28.9% ProS content 14.7%
IDEAL NA UniProt O24629

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR 0 502 1-41 42-179 180-486 487-493 494-502 1-41 180-486 494-502 42-179 487-493 46-62 69-81 108-119 124-133 147-156 170-174 487-493 259-497 259-497 270-316 438-487 263-333 337-418 436-488 250-329 431-488 333-385 180-333 334-391 396-501 93-105 4jk1X(283-517) 9e-35 32.78% 4jk1X(283-517) 2e-38 29.46% PF04542(8-54) 7e-06 46.81% PF04545(3-49) 0.0002 52.0% PF04542 1.6e-19 75.4% PF04539 2.5e-15 61.5% PF04545 2.1e-09 41.9% 1sigA(225-304) 6e-20 38.75% 1ku3A(1-58) 5e-09 38.98% 1l0oC(3-56) 2e-08 35.19% a.177.1 8.7e-42 141.9% a.4.13 1.1e-08 32.8% a.4.13 1.9e-13 49.0%

Sequence

MATAAVIGLNTGKRLLSSSFYHSDVTEKFLSVNDHCSSQYHIASTKSGITAKKASNYSPS
FPSSNRHTQSAKALKESVDVASTEKPWLPNGTDKELEEECYDDDDLISHSVEAILLLQKS
MLEKSWNLSFEKAVSSEYPGKGTIRKKKIPVITCSGISARQRRIGAKKKTNMTHVKAVSD
VSSGKQVRGYVKGVISEDVLSHVEVVRLSKKIKSGLRLDDHKSRLKDRLGCEPSDEQLAV
SLKISRAELQAWLMECHLAREKLAMSNVRLVMSIAQRYDNLGAEMSDLVQGGLIGLLRGI
EKFDSSKGFRISTYVYWWIRQGVSRALVDNSRTLRLPTHLHERLGLIRNAKLRLQEKGIT
PSIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLNGLPGETHHSYIADTRLENNPW
HGYDDLALKEEVSKLISATLGEREKEIIRLYYGLDKECLTWEDISKRIGLSRERVRQVGL
VALEKLKHAARKRKMEAMILKN

Region:1-502
Length:502aa
Label:Full sequence
Reset:click