Input sequence

Protein name RNA polymerase sigma factor sigC
Organism Arabidopsis thaliana Length 571
Disorder content 35.9% ProS content 23.6%
IDEAL NA UniProt O24621

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR 0 571 1-88 89-93 94-98 99-118 119-141 142-167 168-173 174-183 184-266 267-571 89-93 99-118 142-167 174-183 267-571 1-88 94-98 119-141 168-173 184-266 1-15 27-36 45-58 70-88 94-98 119-141 168-173 184-200 215-224 238-243 257-266 333-566 278-566 47-94 336-388 417-493 336-406 410-493 505-558 274-403 501-561 276-405 409-484 467-571 16-25 33-46 149-160 218-235 259-273 4jk1X(284-516) 2e-35 34.19% 4jk1X(225-516) 7e-41 28.33% 3dmpA(11-63) 0.0001 26.42% PF04542(1-53) 0.0001 39.62% PF04539(3-78) 0.0009 33.77% PF04542 3.3e-16 64.4% PF04539 0.0002 22.7% PF04545 2.7e-22 84.7% 1sigA(165-305) 2e-22 23.4% 1ku3A(1-61) 8e-14 37.7% a.177.1 5.8e-30 101.8% a.4.13 7.9e-09 30.6% a.4.13 1.7e-24 88.2%

Sequence

MASFNSFPIPKQIVGSSSSSSSSTSRPRILVRSSLTSSMTSTNSMLVFVHPHPLIKHWLS
LLRSDQTSFPIFVRIPMTSVVATRWSFLSSVKEESRIYQNDSLKACGCASVSPYTAQNNV
YVELKDPKENIGVGSAERSYSSRSMLQYNLLAKNLLALEETFVALDSVRMERDIMLQMGK
LGAAELFKTCLSRYRGSSITSCLSDTTELVDTTPNQQVFVSSRRKVKKKARRSSVTAENG
DQSSLPIGLRTTWNNIDVPRVRRPPKYRKKRERISRNETEMSTGVKIVADMERIRTQLEE
ESGKVASLSCWAAAAGMNEKLLMRNLHYGWYCRDELVKSTRSLVLFLARNYRGLGIAHED
LIQAGYVGVLQGAERFDHTRGYKFSTYVQYWIRKSMSTMVSRHARGVHIPSSIIRTINHI
QKARKTLKTSHGIKYAADEEIAKLTGHSVKKIRAANQCLKVVGSIDKKVGDCFTTKFLEF
TPDTTMESPEEAVMRQSARRDIHDLLEGLEPREKQVMVLRYGLQDYRPKSLEEIGKLLKV
SKEWIRKIERRAMAKLRDQPNAEDLRYYLNQ

Region:1-571
Length:571aa
Label:Full sequence
Reset:click