Input sequence

Protein name Nonsense-mediated mRNA decay protein 2
Organism Schizosaccharomyces pombe Length 1049
Disorder content 25.5% ProS content 7.9%
IDEAL NA UniProt O13824

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil 0 1049 1-5 6-18 19-21 22-22 23-32 33-34 35-125 126-131 132-160 161-193 194-206 207-245 246-249 250-345 346-440 441-634 635-643 644-873 874-928 929-956 957-997 998-1033 1034-1049 6-18 22-22 35-125 161-193 207-245 250-345 441-634 644-873 929-956 998-1033 1-5 19-21 23-32 132-160 194-206 346-440 874-928 957-997 1034-1049 1-5 19-21 23-32 154-160 201-206 377-405 874-879 928-928 1034-1049 380-633 36-302 648-865 380-633 17-340 648-871 945-1047 495-628 41-282 446-634 649-855 864-1047 648-876 437-633 443-634 647-884 696-708 908-937 929-956 4cekA(2-240) 2e-30 31.37% 4lunU(25-277) 1e-14 24.82% 1uw4B(5-229) 2e-13 26.18% 4cekA(2-240) 7e-38 29.8% 4lunU(10-301) 1e-26 19.38% 1uw4B(5-235) 1e-22 23.4% PF04050(69-176) 5e-10 39.81% PF02854(51-189) 3e-05 31.43% PF02854 4.9e-22 83.8% PF02854 1e-43 155.8% PF02854 4.9e-39 140.3% PF04050 1.7e-118 404.3% 1uw4B(5-240) 2e-48 23.55% 1hu3A(7-200) 4e-19 16.08% a.118.1 2.6e-44 142.8% a.118.1 1.1e-52 170.1%

Sequence

MSREEQIKKLNQYLDNRELAFRAKDGDKNIFHTESQLDSSLKKNTAFMKRCKSSLTSENY
DSFIKEIKTLSLKKFIPEITAAIVEGMMKCKATKDILSSVKIVWALNLRFSTAFTGPMLA
NLYCALYPNPGYSLCHESYFELKQNENEVSEKDRSSHLLKVRPLLRFLIEFWLNGVVGTP
EDFVSYLPSTDSNDKKFRKPWFEEQNLKKPLVVLLFNDLMDTRFGFLLLPVLTSLVRTFS
CELFTTEDFEDKETLELVNRLNPVVWRTYLRKSLNSYVDKLEVYCQKRKSLFEELNKQYQ
EQSIIRADPNNEKFQRLANFSKSIESEFSSYASLSEVLNRKASEDLLELNFMEKASSGTN
SVFNASGERSESANVETAQVWDDREQYFFYEVFPNFNEGSIAEMKSSIYESSQEGIRSSS
ENNKKEDDLKDSTGDLNTTQVSSRVDNFLLKLPSMVSLELTNEMALEFYDLNTKASRNRL
IKALCTIPRTSSFLVPYYVRLARILSQLSSEFSTSLVDHARHSFKRMIHRKAKHEYDTRL
LIVRYISELTKFQLMPFHMVFECYKLCINEFTPFDLEVLALLLESCGRFLLRYPETKLQM
QSFLEAIQKKKLASALASQDQLVLENALHFVNPPKRGIIVSKKKSLKEEFLYDLIQIRLK
DDNVFPTLLLLRKFDWKDDYQILYNTIMEVWNIKYNSLNALARLLSALYKFHPEFCIHVI
DDTLESLFSAVNNSDHVEKQKRLAQARFISELCVIHMLDVRAITNFLFHLLPLEKFESFL
TMKASTLTNINNDMFRLRLIVVVLQTCGPSIIRSKTKKTMLTYLLAYQCYFLIQPEMPLD
MLYEFEDVIGYVRPSMKVYMHYEEARNALTERLQAISDDWEEDDTRPVFQGANDGDISSN
EESVYLPEDISDESETDEESSGLEESDLLDSEDEDIDNEMQLSRELDEEFERLTNESLLT
RMHEKNPGFDVPLPLRASSLGSPYVTRNEESASESSHVMFTLLTKRGNKQRSQYLEIPSH
SSLVRSTKNQQTEEIMERKRVKEMVLNFE

Region:1-1049
Length:1049aa
Label:Full sequence
Reset:click