Input sequence

Protein name Semaphorin-4D
Organism Mus musculus Length 861
Disorder content 24.4% ProS content 13.4%
IDEAL NA UniProt O09126

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 861 1-21 22-532 533-538 539-549 550-555 556-560 561-648 649-651 652-732 733-755 756-758 759-762 763-861 22-532 539-549 561-648 733-755 759-762 1-21 550-555 652-732 756-758 763-861 1-17 550-555 711-714 723-732 756-758 763-772 778-790 799-831 843-861 26-648 26-648 53-467 503-530 50-482 502-554 26-501 502-557 558-647 24-501 502-557 558-654 10-25 93-104 734-750 733-755 1olzA(3-621) 0.0 86.84% 1olzA(3-621) 2e-155 86.2% PF01403(3-405) 2e-86 43.84% PF01437(2-29) 0.0006 50.0% PF01403 4.1e-222 748.5% PF01437 1.7e-12 52.1% 1olzA2(3-474) 3e-166 89.08% 1olzA3(1-56) 5e-10 73.21% 1olzA1(1-90) 7e-09 83.33% b.69.12 3.5e-192 600.4% g.16.2 1.6e-16 52.8% b.1.1 1.2e-11 40.4%

Sequence

MRMCAPVRGLFLALVVVLRTAVAFAPVPRLTWEHGEVGLVQFHKPGIFNYSALLMSEDKD
TLYVGAREAVFAVNALNISEKQHEVYWKVSEDKKSKCAEKGKSKQTECLNYIRVLQPLSS
TSLYVCGTNAFQPTCDHLNLTSFKFLGKSEDGKGRCPFDPAHSYTSVMVGGELYSGTSYN
FLGSEPIISRNSSHSPLRTEYAIPWLNEPSFVFADVIQKSPDGPEGEDDKVYFFFTEVSV
EYEFVFKLMIPRVARVCKGDQGGLRTLQKKWTSFLKARLICSKPDSGLVFNILQDVFVLR
APGLKEPVFYAVFTPQLNNVGLSAVCAYTLATVEAVFSRGKYMQSATVEQSHTKWVRYNG
PVPTPRPGACIDSEARAANYTSSLNLPDKTLQFVKDHPLMDDSVTPIDNRPKLIKKDVNY
TQIVVDRTQALDGTFYDVMFISTDRGALHKAVILTKEVHVIEETQLFRDSEPVLTLLLSS
KKGRKFVYAGSNSGVVQAPLAFCEKHGSCEDCVLARDPYCAWSPAIKACVTLHQEEASSR
GWIQDMSGDTSSCLDKSKESFNQHFFKHGGTAELKCFQKSNLARVVWKFQNGELKAASPK
YGFVGRKHLLIFNLSDGDSGVYQCLSEERVRNKTVSQLLAKHVLEVKMVPRTPPSPTSED
AQTEGSKITSKMPVASTQGSSPPTPALWATSPRAATLPPKSSSGTSCEPKMVINTVPQLH
SEKTVYLKSSDNRLLMSLLLFIFVLFLCLFSYNCYKGYLPGQCLKFRSALLLGKKTPKSD
FSDLEQSVKETLVEPGSFSQQNGDHPKPALDTGYETEQDTITSKVPTDREDSQRIDELSA
RDKPFDVKCELKFADSDADGD

Region:1-861
Length:861aa
Label:Full sequence
Reset:click