Input sequence

Protein name Nuclear pore complex protein Nup88
Organism Rattus norvegicus Length 742
Disorder content 22.9% ProS content 11.3%
IDEAL NA UniProt O08658

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam SEG:LCR COILS:coiledCoil 0 742 1-9 10-22 23-56 57-91 92-98 99-219 220-230 231-377 378-386 387-432 433-436 437-442 443-447 448-501 502-502 503-556 557-680 681-742 10-22 57-91 99-219 231-377 387-432 437-442 448-501 557-680 1-9 23-56 220-230 503-556 681-742 23-29 518-523 529-548 681-693 705-742 560-731 525-741 98-447 66-689 42-62 371-382 599-651 4tqlA(20-185) 2e-05 20.34% 4uxvA(159-369) 1e-05 13.7% 3pbpA(40-393) 0.0002 17.22% PF10168(2-571) 0.0 60.32%

Sequence

MAAAAGPVGDGELWQSWLPNHVVFLRLREGLKNQSPAEADKPATSTSPSCPPLPPHLPTR
NLVFGLGGELFLWDAEGSAFLVVRLRGPSGGSVEPPLSQYQRLLCINPPLFEIHQVLLSP
TQHHVALIGTKGLMALELPQRWGKDSEFEGGKATVNCSTIPIAERFFTSSTSLTLKHAAW
YPSEMLDPHIVLLTSDNVIRIYSLREPQTPTKVIVLSEAEEESLILNKGRAYTASLGETA
VAFDFGPLVTVSKNMFEQKDREAVAYPLYILYENGETFLTYVSLLHSPGNIGKLLGPLPM
HPAAEDNYGYDACAILCLPCVPNILVIATESGMLYHCVVLEGEEDDDQTLEKSWDPRADL
IPSLYVFECVELELALKLASAEDDPFASDFSCPIKLHRDPKCPSRYHCSHEAGVHSVGLT
WIHKLHKFLGSDEEDKDSLQELTAEQKCFVEHILCTKPLPCRQPAPIRGFWIVPDILGPT
MICITSTYECLIRPLLSTVHPASPPLLCTREDAGVAESPLRILAEAPDSFEKHIKRILQR
SAANPALLKSSEKDLAPPPEECLQLISRATQVFREQYILKQDLAKEEIQRRVKLLCDQKR
KQLEDLNYCREERKSLREMAERLADKYEEAKEKQEDIMNRMKKVLHSFHTQLPVLSDSER
DMKKELQLIPDQLRHLGNAIKQVTMKKDYQQRKMEKVLSPQKPTITLSAYQRKCIQSILK
EEGEHIREMVKQINDIRNHVNF

Region:1-742
Length:742aa
Label:Full sequence
Reset:click