Input sequence

Protein name Sodium channel protein type 9 subunit alpha
Organism Rattus norvegicus Length 1984
Disorder content 26.4% ProS content 19.1%
IDEAL NA UniProt O08562

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil TMHMM:TMhelix 0 1984 1-10 11-17 18-65 66-443 444-692 693-974 975-981 982-1016 1017-1145 1146-1860 1861-1871 1872-1914 1915-1984 11-17 66-443 693-974 982-1016 1146-1860 1872-1914 1-10 18-65 444-692 975-981 1017-1145 1861-1871 1915-1984 1-10 18-33 47-65 451-458 503-531 536-592 610-632 639-657 666-692 1031-1107 1113-1134 1142-1145 1861-1871 1915-1941 1950-1970 1977-1984 1770-1911 1468-1488 154-174 1762-1914 1468-1488 154-174 155-401 1228-1416 1548-1698 777-955 500-694 983-1200 154-401 777-966 979-1200 1226-1454 1547-1757 1508-1595 739-826 1186-1272 168-268 1561-1638 66-410 710-996 1059-1463 1513-1785 29-45 294-307 433-446 458-493 830-842 870-882 956-975 1106-1127 1132-1151 1212-1223 1286-1301 1430-1445 1610-1622 1735-1746 1965-1981 402-443 123-145 188-210 217-239 249-271 339-358 378-400 737-759 774-796 803-825 861-883 944-966 1190-1209 1230-1247 1262-1284 1311-1333 1433-1455 1510-1532 1543-1565 1572-1594 1645-1667 1735-1757 4jpzB(1-142) 5e-69 90.85% 1byyA(1-21) 8e-05 100.0% 1qg9A(1-21) 0.0002 100.0% 4dckA(1-153) 3e-51 75.16% 1byyA(1-21) 5e-06 100.0% 1qg9A(1-21) 0.0001 100.0% PF00520(2-198) 1e-29 32.02% PF00520(3-170) 5e-28 40.21% PF00520(2-160) 4e-17 40.12% PF00520(1-187) 4e-12 35.64% PF11933(30-219) 2e-28 42.42% PF06512(3-219) 3e-22 37.78% PF00520 2e-74 257.9% PF00520 9.1e-60 209.2% PF06512 4.5e-115 392.9% PF00520 1.1e-70 245.4% PF00520 2.8e-66 230.8% 1orsC(1-89) 8e-18 7.87% 1orsC(2-89) 4e-14 13.48% 1orsC(2-86) 5e-09 13.79% 2e9xC1(1-103) 1e-13 12.39% 2e9xC1(1-82) 1e-06 12.2% f.14.1 6.2e-33 114.4% f.14.1 1.1e-28 99.6% f.14.1 1.4e-40 141.0% f.14.1 1e-34 120.6%

Sequence

MAMLPPPGPQSFVHFTKQSLALIEQRISEEKAKEHKDEKKDDEEEGPKPSSDLEAGKQLP
FIYGDIPPGMVSEPLEDLDPYYADKKTFIVLNKGKAIFRFNATPALYMLSPFSPLRRISI
KILVHSLFSMLIMCTILTNCIFMTLSNPPEWTKNVEYTFTGIYTFESLIKILARGFCVGE
FTFLRDPWNWLDFVVIVFAYLTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQ
SVKKLSDVMILTVFCLSVFALIGLQLFMGNLKHKCFRKELEENETLESIMNTAESEEELK
KYFYYLEGSKDALLCGFSTDSGQCPEGYICVKAGRNPDYGYTSFDTFSWAFLALFRLMTQ
DYWENLYQQTLRAAGKTYMIFFVVVIFLGSFYLINLILAVVAMAYEEQNQANIEEAKQKE
LEFQQMLDRLKKEQEEAEAIAAAAAEFTSIGRSRIMGLSESSSETSRLSSKSAKERRNRR
KKKKQKMSSGEEKGDDEKLSKSGSEESIRKKSFHLGVEGHHRTREKRLSTPNQSPLSIRG
SLFSARRSSRTSLFSFKGRGRDLGSETEFADDEHSIFGDNESRRGSLFVPHRPRERRSSN
ISQASRSPPVLPVNGKMHSAVDCNGVVSLVDGPSALMLPNGQLLPEVIIDKATSDDSGTT
NQMRKKRLSSSYFLSEDMLNDPHLRQRAMSRASILTNTVEELEESRQKCPPWWYRFAHTF
LIWNCSPYWIKFKKLIYFIVMDPFVDLAITICIVLNTLFMAMEHHPMTEEFKNVLAVGNL
IFTGIFAAEMVLKLIAMDPYEYFQVGWNIFDSLIVTLSLIELFLADVEGLSVLRSFRLLR
VFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKINV
DCKLPRWHMNDFFHSFLIVFRVLCGEWIETMWDCMEVAGQTMCLIVYMMVMVIGNLVVLN
LFLALLLSSFSSDNLTAIEEDTDANNLQIAVARIKRGINYVKQTLREFILKSFSKKPKGS
KDTKRTADPNNKKENYISNRTLAEMSKDHNFLKEKDRISGYGSSLDKSFMDENDYQSFIH
NPSLTVTVPIAPGESDLEIMNTEELSSDSDSDYSKEKRNRSSSSECSTVDNPLPGEEEAE
AEPVNADEPEACFTDGCVRRFPCCQVNVDSGKGKVWWTIRKTCYRIVEHSWFESFIVLMI
LLSSGALAFEDIYIEKKKTIKIILEYADKIFTYIFILEMLLKWVAYGYKTYFTNAWCWLD
FLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVNALIGAIPSIM
NVLLVCLIFWLIFSIMGVNLFAGKFYECVNTTDGSRFPTSQVANRSECFALMNVSGNVRW
KNLKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDSVNVNEQPKYEYSLYMYIYFVIFII
FGSFFTLNLFIGVIIDNFNQQKKKLGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPGN
KFQGCIFDLVTNQAFDITIMVLICLNMVTMMVEKEGQTEYMDYVLHWINMVFIILFTGEC
VLKLISLRHYYFTVGWNIFDFVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILR
LIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKKEAGINDMFNFE
TFGNSMICLFQITTSAGWDGLLAPILNSAPPDCDPKKVHPGSSVEGDCGNPSVGIFYFVS
YIIISFLVVVNMYIAVILENFSVATEESTEPLSEDDFEMFYEVWEKFDPDATQFIEFCKL
SDFAAALDPPLLIAKPNKVQLIAMDLPMVSGDRIHCLDILFAFTKRVLGEGGEMDSLRSQ
MEERFMSANPSKVSYEPITTTLKRKQEEVSATIIQRAYRRYRLRQHVKNISSIYIKDGDR
DDDLPNKEDTVFDNVNENSSPEKTDVTASTISPPSYDSVTKPDQEKYETDKTEKEDKEKD
ESRK

Region:1-1984
Length:1984aa
Label:Full sequence
Reset:click