Input sequence

Protein name DNA mismatch repair protein MSH6
Organism Arabidopsis thaliana Length 1324
Disorder content 25.5% ProS content 5.4%
IDEAL NA UniProt O04716

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil 0 1324 1-234 235-272 273-364 365-470 471-475 476-495 496-499 500-516 517-520 521-1278 1279-1284 1285-1324 235-272 365-470 476-495 500-516 521-1278 1285-1324 1-234 273-364 471-475 1279-1284 19-27 125-140 153-160 337-364 471-475 1279-1284 351-1273 338-1271 126-174 1036-1263 693-1022 384-494 380-496 886-977 1028-1273 699-1023 372-488 1153-1259 125-168 122-163 367-491 490-586 699-1024 1027-1274 27-87 212-225 233-262 1220-1230 1294-1308 235-272 2o8bB(17-921) 4e-176 39.22% 2o8bB(3-919) 4e-143 37.41% 2l8dA(13-61) 0.0009 30.61% PF00488(6-222) 3e-51 47.81% PF05192(1-309) 4e-31 33.04% PF01624(5-111) 2e-16 42.74% PF01624 1.3e-58 205.3% PF05190 3.1e-28 104.4% PF00488 2.7e-98 337.1% 1e3mA1(1-296) 6e-55 22.15% 1e3mA4(2-114) 2e-34 27.64% 2v4jC1(3-100) 3e-23 16.36% 2diqA1(28-71) 0.0005 20.45% b.34.9 3.4e-08 28.5% d.75.2 1.7e-36 124.6% c.55.6 1e-07 26.3% a.113.1 3.1e-66 231.0% c.37.1 2.7e-51 159.7%

Sequence

MAPSRRQISGRSPLVNQQRQITSFFGKSASSSSSPSPSPSPSLSNKKTPKSNNPNPKSPS
PSPSPPKKTPKLNPNPSSNLPARSPSPGPDTPSPVQSKFKKPLLVIGQTPSPPQSVVITY
GDEVVGKQVRVYWPLDKKWYDGSVTFYDKGEGKHVVEYEDGEEESLDLGKEKTEWVVGEK
SGDRFNRLKRGASALRKVVTDSDDDVEMGNVEEDKSDGDDSSDEDWGKNVGKEVCESEED
DVELVDENEMDEEELVEEKDEETSKVNRVSKTDSRKRKTSEVTKSGGEKKSKTDTGTILK
GFKASVVEPAKKIGQADRVVKGLEDNVLDGDALARFGARDSEKFRFLGVDRRDAKRRRPT
DENYDPRTLYLPPDFVKKLTGGQRQWWEFKAKHMDKVVFFKMGKFYELFEMDAHVGAKEL
DIQYMKGEQPHCGFPEKNFSVNIEKLVRKGYRVLVVEQTETPDQLEQRRKETGSKDKVVK
REVCAVVTKGTLTDGEMLLTNPDASYLMALTEGGESLTNPTAEHNFGVCLVDVATQKIIL
GQFKDDQDCSALSCLLSEMRPVEIIKPAKVLSYATERTIVRQTRNPLVNNLVPLSEFWDS
EKTIYEVGIIYKRINCQPSSAYSSEGKILGDGSSFLPKMLSELATEDKNGSLALSALGGA
IYYLRQAFLDESLLRFAKFESLPYCDFSNVNEKQHMVLDAAALENLEIFENSRNGGYSGT
LYAQLNQCITASGKRLLKTWLARPLYNTELIKERQDAVAILRGENLPYSLEFRKSLSRLP
DMERLIARMFSSIEASGRNGDKVVLYEDTAKKQVQEFISTLRGCETMAEACSSLRAILKH
DTSRRLLHLLTPGQSLPNISSSIKYFKDAFDWVEAHNSGRVIPHEGADEEYDCACKTVEE
FESSLKKHLKEQRKLLGDASINYVTVGKDEYLLEVPESLSGSVPHDYELCSSKKGVSRYW
TPTIKKLLKELSQAKSEKESALKSISQRLIGRFCEHQEKWRQLVSATAELDVLISLAFAS
DSYEGVRCRPVISGSTSDGVPHLSATGLGHPVLRGDSLGRGSFVPNNVKIGGAEKASFIL
LTGPNMGGKSTLLRQVCLAVILAQIGADVPAETFEVSPVDKICVRMGAKDHIMAGQSTFL
TELSETAVMLTSATRNSLVVLDELGRGTATSDGQAIAESVLEHFIEKVQCRGFFSTHYHR
LSVDYQTNPKVSLCHMACQIGEGIGGVEEVTFLYRLTPGACPKSYGVNVARLAGLPDYVL
QRAVIKSQEFEALYGKNHRKTDHKLAAMIKQIISSVASDSDYSASKDSLCELHSMANTFL
RLTN

Region:1-1324
Length:1324aa
Label:Full sequence
Reset:click