Input sequence

Protein name Voltage-dependent P/Q-type calcium channel subunit alpha-1A
Organism Homo sapiens Length 2506
Disorder content 42.1% ProS content 18.1%
IDEAL NA UniProt O00555

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil TMHMM:TMhelix 0 2506 1-71 72-403 404-463 464-768 769-774 775-826 827-1212 1213-1722 1723-1728 1729-1974 1975-2506 72-403 464-768 775-826 1213-1722 1729-1974 1-71 404-463 769-774 827-1212 1975-2506 1-14 45-49 58-71 404-425 431-457 769-774 827-833 854-871 937-941 954-963 983-989 1013-1031 1037-1044 1050-1077 1083-1104 1119-1140 1153-1169 1176-1195 1983-1991 2001-2016 2025-2034 2081-2088 2113-2119 2126-2129 2135-2145 2155-2178 2223-2234 2243-2271 2281-2285 2296-2304 2345-2351 2454-2460 2469-2477 2491-2506 367-408 1336-1363 1894-1971 1823-1973 367-411 1336-1363 1279-1471 140-359 1599-1809 522-711 135-359 520-712 1278-1509 1599-1809 1561-1650 1239-1367 482-592 94-206 1613-1689 2326-2470 42-368 479-721 1218-1518 1522-1813 13-46 226-245 598-609 612-630 719-743 935-950 980-1011 1018-1031 1121-1140 1191-1216 1488-1506 1656-1672 1719-1729 2102-2111 2150-2166 2210-2223 2261-2284 2313-2325 2416-2436 709-745 98-117 137-159 223-245 337-359 486-508 518-540 613-635 688-710 1240-1262 1282-1304 1311-1330 1376-1398 1489-1511 1571-1593 1600-1622 1690-1709 1787-1809 4dexB(1-42) 3e-14 88.1% 2lcmA(1-28) 1e-07 100.0% 3g43E(2-68) 2e-06 42.31% 4jpzB(3-141) 5e-18 21.85% 4dexB(1-45) 4e-15 82.22% 2lcmA(1-28) 2e-05 100.0% PF00520(2-170) 9e-28 37.44% PF00520(6-198) 1e-26 38.5% PF00520(1-198) 4e-23 38.43% PF00520(3-197) 6e-18 35.0% PF00520 1.1e-70 245.5% PF00520 1.9e-58 204.8% PF00520 7.2e-69 239.4% PF00520 1.9e-70 244.6% 1orsC(2-91) 1e-15 10.99% 1orsC(2-124) 9e-12 17.69% 1orsC(2-108) 9e-12 14.29% 1orsC(2-109) 5e-09 16.52% 2e9xC1(1-84) 2e-06 10.71% 1ikpA3(15-141) 4e-05 6.67% f.14.1 6.1e-34 117.9% f.14.1 2.8e-32 112.1% f.14.1 9.7e-30 103.3% f.14.1 3.1e-34 118.9%

Sequence

MARFGDEMPARYGGGGSGAAAGVVVGSGGGRGAGGSRQGGQPGAQRMYKQSMAQRARTMA
LYNPIPVRQNCLTVNRSLFLFSEDNVVRKYAKKITEWPPFEYMILATIIANCIVLALEQH
LPDDDKTPMSERLDDTEPYFIGIFCFEAGIKIIALGFAFHKGSYLRNGWNVMDFVVVLTG
ILATVGTEFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIGLLLFFAILIF
AIIGLEFYMGKFHTTCFEEGTDDIQGESPAPCGTEEPARTCPNGTKCQPYWEGPNNGITQ
FDNILFAVLTVFQCITMEGWTDLLYNSNDASGNTWNWLYFIPLIIIGSFFMLNLVLGVLS
GEFAKERERVENRRAFLKLRRQQQIERELNGYMEWISKAEEVILAEDETDGEQRHPFDAL
RRTTIKKSKTDLLNPEEAEDQLADIASVGSPFARASIKSAKLENSTFFHKKERRMRFYIR
RMVKTQAFYWTVLSLVALNTLCVAIVHYNQPEWLSDFLYYAEFIFLGLFMSEMFIKMYGL
GTRPYFHSSFNCFDCGVIIGSIFEVIWAVIKPGTSFGISVLRALRLLRIFKVTKYWASLR
NLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFDEGTPPTNFDTFPAAIMTV
FQILTGEDWNEVMYDGIKSQGGVQGGMVFSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQ
ELTKDEQEEEEAANQKLALQKAKEVAEVSPLSAANMSIAVKEQQKNQKPAKSVWEQRTSE
MRKQNLLASREALYNEMDPDERWKAAYTRHLRPDMKTHLDRPLVVDPQENRNNNTNKSRA
AEPTVDQRLGQQRAEDFLRKQARYHDRARDPSGSAGLDARRPWAGSQEAELSREGPYGRE
SDHHAREGSLEQPGFWEGEAERGKAGDPHRRHVHRQGGSRESRSGSPRTGADGEHRRHRA
HRRPGEEGPEDKAERRARHREGSRPARGGEGEGEGPDGGERRRRHRHGAPATYEGDARRE
DKERRHRRRKENQGSGVPVSGPNLSTTRPIQQDLGRQDPPLAEDIDNMKNNKLATAESAA
PHGSLGHAGLPQSPAKMGNSTDPGPMLAIPAMATNPQNAASRRTPNNPGNPSNPGPPKTP
ENSLIVTNPSGTQTNSAKTARKPDHTTVDIPPACPPPLNHTVVQVNKNANPDPLPKKEEE
KKEEEEDDRGEDGPKPMPPYSSMFILSTTNPLRRLCHYILNLRYFEMCILMVIAMSSIAL
AAEDPVQPNAPRNNVLRYFDYVFTGVFTFEMVIKMIDLGLVLHQGAYFRDLWNILDFIVV
SGALVAFAFTGNSKGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVFNIL
IVYMLFMFIFAVVAVQLFKGKFFHCTDESKEFEKDCRGKYLLYEKNEVKARDREWKKYEF
HYDNVLWALLTLFTVSTGEGWPQVLKHSVDATFENQGPSPGYRMEMSIFYVVYFVVFPFF
FVNIFVALIIITFQEQGDKMMEEYSLEKNERACIDFAISAKPLTRHMPQNKQSFQYRMWQ
FVVSPPFEYTIMAMIALNTIVLMMKFYGASVAYENALRVFNIVFTSLFSLECVLKVMAFG
ILNYFRDAWNIFDFVTVLGSITDILVTEFGNNFINLSFLRLFRAARLIKLLRQGYTIRIL
LWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIGIDVEDEDSDEDEFQITEHNNFRT
FFQALMLLFRSATGEAWHNIMLSCLSGKPCDKNSGILTRECGNEFAYFYFVSFIFLCSFL
MLNLFVAVIMDNFEYLTRDSSILGPHHLDEYVRVWAEYDPAAWGRMPYLDMYQMLRHMSP
PLGLGKKCPARVAYKRLLRMDLPVADDNTVHFNSTLMALIRTALDIKIAKGGADKQQMDA
ELRKEMMAIWPNLSQKTLDLLVTPHKSTDLTVGKIYAAMMIMEYYRQSKAKKLQAMREEQ
DRTPLMFQRMEPPSPTQEGGPGQNALPSTQLDPGGALMAHESGLKESPSWVTQRAQEMFQ
KTGTWSPEQGPPTDMPNSQPNSQSVEMREMGRDGYSDSEHYLPMEGQGRAASMPRLPAEN
QRRRGRPRGNNLSTISDTSPMKRSASVLGPKARRLDDYSLERVPPEENQRHHQRRRDRSH
RASERSLGRYTDVDTGLGTDLSMTTQSGDLPSKERDQERGRPKDRKHRQHHHHHHHHHHP
PPPDKDRYAQERPDHGRARARDQRWSRSPSEGREHMAHRQGSSSVSGSPAPSTSGTSTPR
RGRRQLPQTPSTPRPHVSYSPVIRKAGGSGPPQQQQQQQQQQQQQAVARPGRAATSGPRR
YPGPTAEPLAGDRPPTGGHSSGRSPRMERRVPGPARSESPRACRHGGARWPASGPHVSEG
PPGPRHHGYYRGSDYDEADGPGSGGGEEAMAGAYDAPPPVRHASSGATGRSPRTPRASGP
ACASPSRHGRRLPNGYYPAHGLARPRGPGSRKGLHEPYSESDDDWC

Region:1-2506
Length:2506aa
Label:Full sequence
Reset:click