Input sequence

Protein name CCCH-type zinc finger protein oma-1
Organism Caenorhabditis elegans Length 407
Disorder content 73.2% ProS content 17.2%
IDEAL NA UniProt G5EC86

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR 0 407 1-109 110-187 188-376 377-407 110-187 377-407 1-109 188-376 1-21 30-34 46-52 188-191 205-208 271-277 283-289 292-292 327-333 370-376 113-179 107-145 152-182 114-139 113-139 155-181 107-145 154-180 107-146 150-183 345-369 1rgoA(4-66) 7e-14 50.75% 1m9oA(1-39) 1e-09 41.03% 1m9oA(4-34) 1e-06 41.94% PF00642(2-27) 0.0001 53.85% PF00642 3e-10 44.7% PF00642 3.8e-11 47.6% 1m9oA(1-39) 1e-10 41.03% 1m9oA(6-32) 0.0002 48.15% g.66.1 1.3e-10 37.0% g.66.1 2.8e-09 34.8%

Sequence

MNVNGENNEKIDEHHLESSLAGVPTLPVSPLDHAKDLSQTNPNAQIGDLVTQTANLIAIK
KQLLEDIAFNQHIQSMQVRAIQSFPQNNQVAPPFQQFDPRRRGLARMQKPESYKTVICQA
WLESKTCSFADNCRFAHGEEELRPTFVEPLQNNKYKTKLCDKYTTTGLCPYGKRCLFIHP
DHGPNAYIRADKLLEVSQRHALADIRDQMEQHIMTNGRIAAPPLSAIQHPLEMFARPSTP
DEPAAKLPLGPTPVSTRGPRYELPTKELHDAEGAMTYPPSRWPLDPSMFALDAWNMAHRP
ASPLDSMVLGSAPNAGSFGMLGKQNTPGGVSGYSSAGSTPSQDLSSSSLNAASAAAAAAY
FANSAVAQSLLMKSVATDPMMSCNGPFSPMPGFDQLAENMTKHLNLW

Region:1-407
Length:407aa
Label:Full sequence
Reset:click