Input sequence

Protein name Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH8
Organism Arabidopsis thaliana Length 883
Disorder content 25.1% ProS content 19.6%
IDEAL NA UniProt F4JMJ3

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR 0 883 1-93 94-125 126-216 217-845 846-883 94-125 217-845 1-93 126-216 846-883 1-15 20-27 33-50 60-93 126-199 213-216 855-874 219-858 234-647 621-843 736-836 621-686 225-382 458-552 609-703 737-838 382-689 201-366 231-377 372-693 55-63 98-114 276-288 537-552 606-620 2xauA(88-741) 1e-154 50.68% 4cbgA(1-364) 1e-43 17.02% 3i4uA(21-238) 3e-19 42.6% PF07717(1-109) 1e-16 40.37% PF04408(13-77) 3e-09 43.94% PF00270 3.9e-05 -11.5% PF00271 6.3e-14 56.9% PF04408 3.4e-29 107.6% PF07717 1.6e-35 128.6% 1hrkA(37-354) 2e-39 8.96% 1q1lA(15-198) 7e-23 14.59% c.37.1 2.2e-40 133.0% c.37.1 1.8e-62 201.4%

Sequence

METNVPEKKILGFPEEMNSTIQFLSVEKTTCRLPVSIKFNIPKKISTKRRRISVEEEEEE
EDENKTKLSSWEKVLSSDEILRLREVSRRKYLTDRENKKVEELRDERKDDDDVEGYRFPD
AYDQEGCIDQKKRFDVAKERYCERRRSGRVVTEQEAWEDHQAQKARVRFGAKDKKQVVDG
YEFVFDDLTGFVEESSEAETGKHRGCYSKTAAEKAREGREFLPIHGYREELLKLIEENQV
LVIVGETGSGKTTQIPQYLQEAGYTKRGKIGCTQPRRVAAMSVASRVAQEVGVKLGHEVG
YSIRFEDCTSEKTVIKYMTDGMLLRELLIEPKLDSYSVIIIDEAHERTLSTDILFALVKD
VAKVRPDLRLIISSATLEAKKFSEYFDSARIYLIPGRRYPVEKLFRKCPEPDYLETVIRT
VVQIHQTEAIGDILVFLTGQEEIETVETNLKRRMMDLGTKGSEIIICPIYSNLPTPLQAK
VFEPAPKGTRKVVLATNIAETSLTIDGVKYVIDPGYCKINSYNPRTGMESLLVTPISKAS
AAQRAGRSGRTGPGKCFRLYNIKDLEPTTIPEIQRANLASVVLTLKSLGIQDVFNFDFMD
PPPENALLKALELLYALGALDEIGEITKVGERMVEFPVDPMLSKMIVGSEKYKCSKEIIT
IAAMLSVGNSVFYRPKNQQVFADKARMDFYEDTENVGDHIALLRVYNSWKEENYSTQWCC
EKFIQSKSMKRARDIRDQLLGLLNKIGVELTSNPNDLDAIKKAILAGFFPHSAKLQKNGS
YRRVKEPQTVYVHPNSGLFGASPSKWLVYHELVLTTKEYMRHTTEMKPEWLIEIAPHYYK
LKDIEDTRPKKTQRRIEEASTSKVDTNKKTRTSKVDTNKKSKR

Region:1-883
Length:883aa
Label:Full sequence
Reset:click