Input sequence

Protein name Probable E3 ubiquitin ligase SUD1
Organism Arabidopsis thaliana Length 1108
Disorder content 15.5% ProS content 8.9%
IDEAL NA UniProt F4JKK0

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB HMMER:Pfam RPS-BLAST:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil TMHMM:TMhelix 0 1108 1-63 64-244 245-288 289-316 317-318 319-724 725-728 729-776 777-784 785-790 791-795 796-883 884-885 886-1036 1037-1039 1040-1067 1068-1108 64-244 289-316 319-724 729-776 785-790 796-883 886-1036 1040-1067 1-63 245-288 317-318 725-728 777-784 791-795 884-885 1037-1039 1068-1108 1-5 245-288 317-318 725-728 777-784 791-795 884-885 1037-1039 1083-1108 67-118 67-120 68-114 67-120 45-128 10-44 59-66 244-260 776-788 798-809 289-316 151-173 197-219 341-363 460-482 525-547 573-595 631-653 673-693 796-818 843-865 886-908 923-942 983-1002 1017-1036 2d8sA(17-68) 2e-12 53.85% 2m6mA(20-81) 2e-12 41.94% PF00097 1.8e-18 72.0% 1vyxA(8-59) 2e-18 31.48% g.44.1 1.5e-08 28.9%

Sequence

MEISPADSLSISGAAASEVVSEPSVSSSSSSSSPNQASPNPFSNMDPAVSTATGSRYVDD
DEDEEDVCRICRNPGDADNPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHPFSF
SPVYADNAPSRLPFQEFVVGIAMKACHVLQFFLRLSFVLSVWLLTIPFITFWIWRLAFVR
TFGEAQRLFLSHISTTVILTDCLHGFLLSASIVFIFLGATSLRDYFRHLRELGGQEERDD
DVDRNGARAARRPAGQANRNLAGEGNGEDAGDQGAAVGQIARRNPENVLARLDIQAARLE
AQVEQMFDGLDDADGAEDVPFDELVGMQGPVFHLVENAFTVLASNMIFLGVVIFVPFTLG
RIILYHVSWLFAAARGPAVAASLHLTDTGLSLENITLKSALTAVSNLTSEGQGNGLLGQL
TEMMKVNGSELNGANNTLSVATDLLKGSTVGASKLSDITTLAVGYMFIVFLVFLYLGIIA
LIRYAKGEPLTVGRFYGIASIVEAVPSLLRQFLAAMRHLMTMIKVAFLLVIELGVFPLMC
GWWLDVCTVRMFGKTMSHRVQFLSISPLASSLVHWVVGIMYMLQISIFVSLLRGVLRPGV
LYFLRDPADPNYNPFRDLIDDPVHKHARRVLLSVAVYGSLIVMLVFLPVKLAIRMAPSIF
PLDISVSDPFTEIPADMLLFQICIPFIIEHFRLRTTIKSLLRCWFTGVGWALGLTDFLLP
RPEDNIGQDNGNGEPGRQNRAQVLQVGGPDRAMAALPVADDPNRSRLRAGNVNTGEEYED
DDEQSDSDRYNFVVRIILLLLVAWVTLLLFNSALIVVPVSLGRALFSAIPILPITHGIKC
NDLYAFVIGTYAFWTTISGARYAIEHVKSKRTSVLLNQIWKWCGIVFKSSVLLAIWVFII
PVLIGLLFELLVIVPMRVPVDESPVFLLYQDWALGLIFLKIWTRLVMLDHMLPIVDDSWR
AKFERVREDGFSRLQGLWVLREIVFPIVMKLLTALCVPYVLARGVFPMLGYPLVVNSAVY
RFAWIGCLSVSLFCFCAKRCHVWFRNLHNSIRDDRYLIGRRLHNFGEAALANQNQNQSSE
DAGDGVLIGREGDVDNGLRLRRAIQQEA

Region:1-1108
Length:1108aa
Label:Full sequence
Reset:click