Input sequence

Protein name Pre-mRNA-processing protein 40B
Organism Arabidopsis thaliana Length 992
Disorder content 56.5% ProS content 14.3%
IDEAL NA UniProt F4JCC1

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil 0 992 1-246 247-250 251-261 262-267 268-447 448-579 580-584 585-702 703-708 709-846 847-957 958-985 986-992 247-250 262-267 448-579 585-702 709-846 958-985 1-246 251-261 268-447 580-584 847-957 986-992 34-38 208-237 251-261 268-284 316-323 331-335 411-421 429-432 444-447 580-584 847-854 904-921 929-937 986-992 209-279 442-507 516-639 446-639 208-277 205-234 246-275 452-501 519-569 518-576 216-284 183-239 11-196 202-238 235-280 439-507 509-573 574-642 648-723 781-850 641-659 779-791 960-985 507-534 626-665 711-738 782-809 958-985 2l5fA(16-86) 8e-17 49.3% 1uzcA(4-69) 3e-12 50.0% 4fqgA(4-119) 8e-06 24.81% 4fqgA(1-186) 2e-16 20.67% 2jxwA(6-75) 2e-11 34.29% PF00397 8.3e-11 46.5% PF00397 1.3e-09 42.5% PF01846 2.1e-12 51.8% PF01846 1.7e-10 45.5% 2cqnA1(2-61) 4e-12 23.33% 2pstX1(2-60) 7e-08 14.29% 2e45A1(2-48) 0.0004 21.05% 1yu0A2(8-196) 0.0009 8.21% b.72.1 6.3e-08 32.8% b.72.1 2e-10 45.7% a.159.2 3.1e-16 58.9% a.159.2 4.1e-14 51.3% a.159.2 3e-05 19.7% a.159.2 0.00091 14.4% a.159.2 3.9e-11 40.7%

Sequence

MANNHQYPGIQPFQHPNASSIDLPRGFAPPMNFQFLPTIQAPQSEQVARLSSQNFQCVGR
GGTVLSIGYPPQSYAPQLLQSMHHSHERPSQLNQVQVQHVPLGPPTLISQPNVSIASGTS
LHQPYVQTPDIGMPGFGGPRALFSYPSATSYEGSRVPPQVTGPSIHSQAQQRASIIHTSA
ESSIMNPTFEQPKAAFLKPLPSQKALTDWVEHTSADGRKYFFNKRTKKSTWEKPVELMTL
FERADARTDWKEHSSPDGRKYYYNKITKQSTWTMPEEMKIVREQAEIASVQGPHAEGIID
ASEVLTRSDTASTAAPTGLPSQTSTSEGVEKLTLTSDLKQPASVPGSSSPVENVDRVQMS
ADETSQLCDTSETDGLSVPVTETSAATLVEKDEISVGNSGDSDDMSTKNANQGSGSGPKE
SQKPMVESEKVESQTEEKQIHQESFSFNNKLEAVDVFKSLLKSAKVGSDWTWEQAMREII
NDKRYGALRTLGERKQAFNEFLLQTKRAAEEERLARQKKLYEDFKRMLEECVELTPSTRW
SKTVTMFEDDERFKALEREKDRRNIFEDHVSELKEKGRVKALEDRKRNIIEYKRFLESCN
FIKPNSQWRKVQDRLEVDERCSRLEKIDQLEIFQEYLRDLEREEEEKKKIQKEELKKVER
KHRDEFHGLLDEHIATGELTAKTIWRDYLMKVKDLPVYSAIASNSSGATPKDLFEDAVED
LKKRDHELKSQIKDVLKLRKVNLSAGSTFDEFKVSISEDIGFPLIPDVRLKLVFDDLLER
AKEKEEKEARKQTRQTEKLVDMLRSFKDITASSSWEELKHLVEGSEKCSTIGDESFRKRC
FEDYVSLLKEQSNRIKQNKKVPEDVREEHDKGRDKYGREKDRVRERDSDDHHKKGAAGKY
NHDMNEPHGKERRRSGRDSHNRHRERHTSVKENDTDHFKESHKAGGGHKKSRHQRGWVSE
AEVEGKEKRRRKEEAREHTKEEELEDGECGRY

Region:1-992
Length:992aa
Label:Full sequence
Reset:click