Input sequence

Protein name rRNA biogenesis protein RRP5
Organism Arabidopsis thaliana Length 1920
Disorder content 11.7% ProS content 6.2%
IDEAL NA UniProt F4J8K6

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil 0 1920 1-111 112-168 169-174 175-196 197-201 202-295 296-302 303-849 850-856 857-939 940-948 949-1032 1033-1040 1041-1045 1046-1131 1132-1146 1147-1235 1236-1244 1245-1249 1250-1340 1341-1347 1348-1532 1533-1619 1620-1917 1918-1920 112-168 175-196 202-295 303-849 857-939 949-1032 1046-1131 1147-1235 1250-1340 1348-1532 1620-1917 1-111 850-856 1033-1040 1236-1244 1533-1619 1918-1920 47-78 1533-1617 1918-1920 1458-1531 1361-1444 1454-1529 749-823 1372-1449 577-678 1260-1334 486-606 122-259 1052-1143 1674-1913 215-311 1456-1526 582-644 1821-1913 1648-1740 486-557 749-822 862-930 1455-1529 1673-1913 1451-1529 749-824 1257-1336 573-644 485-558 1358-1444 127-217 1052-1110 861-930 115-283 301-465 477-633 740-825 858-936 1041-1216 1257-1359 1356-1440 1446-1533 1642-1874 16-31 82-92 97-111 680-687 939-955 1026-1030 1040-1050 1621-1640 1876-1892 1620-1647 4nngA(16-88) 2e-07 31.08% 3bzcA(647-730) 0.0002 27.38% 2k4kA(3-77) 4e-19 30.26% 2k4kA(4-78) 4e-09 28.0% 2k4kA(11-88) 1e-06 24.36% 4nngA(17-114) 8e-10 28.43% 4nngA(17-86) 3e-09 28.0% 4nngA(13-133) 5e-09 18.46% 4nngA(11-126) 2e-07 21.58% 4nngA(15-100) 0.0005 22.83% 2ondA(10-261) 3e-10 17.76% 1wi5A(11-113) 2e-09 21.36% PF00575(2-71) 7e-11 46.48% PF00575(10-72) 3e-05 38.1% PF05843(39-132) 1e-07 41.49% PF05843(40-132) 4e-06 30.93% PF00575 1.6e-05 28.9% PF00575 6.5e-11 46.9% PF00575 0.0002 25.3% PF00575 8.5e-21 79.7% 2ondA1(52-269) 3e-23 19.31% 2ahoB2(4-78) 2e-14 18.75% 1sroA(2-76) 3e-09 26.32% 1sroA(3-76) 7e-09 30.0% 1sroA(2-72) 8e-08 26.39% 1sroA(1-75) 2e-06 25.33% 2oceA4(8-94) 8e-07 26.44% 2ba0A1(5-82) 7e-06 14.29% 2ba0A1(4-62) 2e-05 22.03% 1kl9A2(9-73) 0.0002 20.0% b.40.4 7.3e-23 79.5% b.40.4 9.4e-16 55.0% b.40.4 6.6e-31 107.2% b.40.4 2.1e-16 57.2% b.40.4 1.7e-12 42.9% b.40.4 1.7e-17 60.9% b.40.4 1.5e-11 42.5% b.40.4 6e-15 52.2% b.40.4 8.3e-21 72.4% a.118.6 1.5e-13 46.4%

Sequence

MVVPQKKFANGKRNDSTKSFKPMKKPFKKTKDDVAARSEAMALQLEDVPDFPRGGGTSLS
KKEREKLYEEVDAEFDADERVSKKSKGGKSKKRIPSDLDDLGLLFGGGLHGKRPRYANKI
TTKNISPGMKLLGVVTEVNQKDIVISLPGGLRGLVRASEVSDFTDRGIEDDENELLGDIF
SVGQLVPCIVLELDDDKKEAGKRKIWLSLRLSLLHKGFSFDSFQLGMVFSANVKSIEDHG
SILHFGLPSITGFIEISDDGNQESGMKTGQLIQGVVTKIDRDRKIVHLSSDPDSVAKCLT
KDLSGMSFDLLIPGMMVNARVQSVLENGILFDFLTYFNGTVDLFHLKNPLSNKSWKDEYN
QNKTVNARILFIDPSSRAVGLTLSPHVVCNKAPPLHVFSGDIFDEAKVVRIDKSGLLLEL
PSKPTPTPAYVSTYDAAGDEVTKLEKKFKEGNHIRVRVLGLKQMEGLAVGTLKESAFEGP
VFTHSDVKPGMVTKAKVISVDTFGAIVQFSGGLKAMCPLRHMSEFEVTKPRKKFKVGAEL
VFRVLGCKSKRITVTYKKTLVKSKLPILSSYTDATEGLVTHGWITKIEKHGCFVRFYNGV
QGFVPRFELGLEPGSDPDSVFHVGEVVKCRVTSAVHGTQRITLSFMIKPSSVSEDDSIKL
GSIVSGIIDTITSQAVIVRVKSKSVVKGTISAEHLADHHEQAKLIMSLLRPGYELDKLLV
LDIEGNNMALSSKYSLIKLAEELPSDFNQLQPNSVVHGYVCNLIENGCFVRFLGRLTGFA
PRSKAIDDPKADVSESFFVGQSVRANIVDVNQEKSRITLSLKQSSCASVDASFVQEYFLM
DEKISDLQSSDITKSDCSWVEKFSIGSLIKGTIQEQNDLGVVVNFDNINNVLGFIPQHHM
GGATLVPGSVVNAVVLDISRAERLVDLSLRPELLNNLTKEVSNSSKKKRKRGISKELEVH
QRVSAVVEIVKEQHLVLSIPEHGYTIGYASVSDYNTQKLPVKQFSTGQSVVASVKAVQNP
LTSGRLLLLLDSVSGTSETSRSKRAKKKSSCEVGSVVHAEITEIKPFELRVNFGNSFRGR
IHITEVNDASTSDEPFAKFRVGQSISARVVAKPCHTDIKKTQLWELSVKPAMLKDSSEFN
DTQESEQLEFAAGQCVIGYVYKVDKEWVWLAVSRNVTARIFILDTSCKAHELEEFERRFP
IGKAVSGYVLTYNKEKKTLRLVQRPLLFIHKSIANGGGSKTDKPDSSIPGDDDTLFIHEG
DILGGRISKILPGVGGLRVQLGPYVFGRVHFTEINDSWVPDPLDGFREGQFVKCKVLEIS
SSSKGTWQIELSLRTSLDGMSSADHLSEDLKNNDNVCKRFERIEDLSPDMGVQGYVKNTM
SKGCFIILSRTVEAKVRLSNLCDTFVKEPEKEFPVGKLVTGRVLNVEPLSKRIEVTLKTV
NAGGRPKSESYDLKKLHVGDMISGRIRRVEPFGLFIDIDQTGMVGLCHISQLSDDRMENV
QARYKAGESVRAKILKLDEEKKRISLGMKSSYLMNGDDDKAQPLSEDNTSMECDPINDPK
SEVLAAVDDFGFQETSGGTSLVLAQVESRASIPPLEVDLDDIEETDFDSSQNQEKLLGAN
KDEKSKRREKQKDKEEREKKIQAAEGRLLEHHAPENADEFEKLVRSSPNSSFVWIKYMAF
MLSLADIEKARSIAERALRTINIREEEEKLNIWVAYFNLENEHGNPPEESVKKVFERARQ
YCDPKKVYLALLGVYERTEQYKLADKLLDEMIKKFKQSCKIWLRKIQSSLKQNEEAIQSV
VNRALLCLPRHKHIKFISQTAILEFKCGVADRGRSLFEGVLREYPKRTDLWSVYLDQEIR
LGEDDVIRSLFERAISLSLPPKKMKFLFKKFLEYEKSVGDEERVEYVKQRAMEYANSTLA

Region:1-1920
Length:1920aa
Label:Full sequence
Reset:click