Input sequence

Protein name Regulator of nonsense transcripts UPF2
Organism Arabidopsis thaliana Length 1181
Disorder content 30.3% ProS content 10.6%
IDEAL NA UniProt F4IUX6

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil 0 1181 1-4 5-46 47-51 52-139 140-143 144-152 153-316 317-341 342-374 375-424 425-452 453-462 463-656 657-664 665-895 896-1081 1082-1107 1108-1181 5-46 52-139 153-316 342-374 425-452 463-656 665-895 1082-1107 1-4 144-152 317-341 375-424 453-462 896-1081 1108-1181 149-152 329-341 382-387 394-405 989-994 998-1022 1072-1081 1108-1129 1155-1181 666-890 468-655 13-313 666-891 13-314 467-655 345-375 493-648 750-865 1000-1121 57-277 468-656 671-872 944-1122 666-893 467-655 73-202 465-661 666-901 379-397 422-460 912-926 939-950 968-988 1103-1114 1142-1163 5-39 252-283 425-452 1uw4B(1-237) 9e-52 43.46% 4cekA(54-240) 3e-51 52.91% 4cemA(1-302) 3e-41 35.69% 1uw4B(1-238) 3e-67 42.86% 4cemA(1-303) 2e-62 33.97% 4cekA(53-240) 8e-54 52.63% 4cekA(2-32) 0.0004 58.06% PF02854(27-187) 4e-07 25.93% PF02854(83-188) 1e-06 32.76% PF04050(63-175) 7e-05 37.7% PF02854 9.6e-06 29.7% PF02854 2.5e-51 181.1% PF02854 6.9e-57 199.6% PF04050 1.5e-114 391.1% 1uw4B(1-237) 4e-79 42.92% 1hu3A(15-200) 2e-26 17.37% a.118.1 4.2e-15 47.9% a.118.1 3.1e-55 178.3% a.118.1 1.2e-68 221.9%

Sequence

MDHPEDESHSEKQDDEEALARLEEIKKSIEAKLTLRQNNLNPERPDSAYLRTLDSSIKRN
TAVIKKLKQINEEQREGLMDDLRGVNLSKFVSEAVTAICEAKLKSSDIQAAVQICSLLHQ
RYKEFSASLTQGLLKVFFPGKSAEDLEADKNSKAMKKRSTLKLLLELYYVGVIEDSNIFI
NIIKDLTSVEQLKDRDTTQTNLTLLTSFARQGRIFLGLPISGQDEDFFKGLDVTADQKKS
FKKAFNTYYDALADLLQSEHKLLLQMEKENAKLVNAKGELSEDSASSYEKLRKSYDHLYR
NISSLAEALDMQPPVMPEDGTTRLTAGDEASPSGTVKDTSVPEPIWDDEDTKTFYECLPD
LRAFVPAVLLGEAEPKSNEQSAKAKEKLSESSSEVVENQQTTEDTTEVSADSASMDDRSN
AEQPKEKEEVEKEKAKDTKKEKGKEKDSEKKMEHEKEKGKSLDVANFERLLQRLPGCVSR
DLIDQLTVEYCYLNSKTNRKKLVKALFNVPRTSLELLAYYSRMVATLASCMKDIPSMLVQ
MLEDEFNSLVHKKDQMNIETKIRNIRFIGELCKFKIVPAGLVFSCLKACLDEFTHHNIDV
ACNLLETCGRFLYRSPETTLRMTNMLDILMRLKNVKNLDPRQSTLVENAYYLCKPPERSA
RISKVRPPLHQYVRKLLFSDLDKDSIANVLKQLRKLPWSECEQYILKCFMKVHKGKYGQI
HLIASLTSGLSRHHDEFVVAVVDEVLEEIRVGLELNEYGAQQKRLAHMRFLGELYNYEHV
DSSVIFETLYLTLLYGHDTSEQEVLDPPEDFFRVRMVIILLETCGHYFDRGSSKKRLDQF
LIHFQRYILSKGHLPLDIEFDLQDLFANLRPNMTRYSTIDEVNAAILQLEEREHASSGDK
VSIERHSDTKPSNKSSSDVISSNGKSTAKDIRENGEAHGEESDSDSGSGSVVRDGQNEEL
DDGNHERGSESGDGDDYDDGDGPGSDDDKFRVRQKVVTVDLEEQADFDQELKALLQESME
QRKLELRGRPALNMTIPMSVFEGSGKDHHHFGRVVGENGEEVLDEENGEQREVQVKVLVK
RGNKQQTRQMLIPSDCALVQSTKQKEAAELEEKQDIKRLVLEYNERDEEEANGLGTQILN
WTSGGSRGSTRTGEGSGKSGGSRHRFYYHQGGGGSYHARRK

Region:1-1181
Length:1181aa
Label:Full sequence
Reset:click