Input sequence

Protein name Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH6
Organism Arabidopsis thaliana Length 1044
Disorder content 23.6% ProS content 12.6%
IDEAL NA UniProt F4IJV4

Prediction

Order Disorder ProS BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil 0 1044 1-2 3-69 70-152 153-192 193-234 235-238 239-240 241-246 247-297 298-395 396-1029 1030-1044 3-69 153-192 239-240 247-297 396-1029 1-2 70-152 193-234 241-246 298-395 1030-1044 193-197 203-234 241-246 298-381 1036-1040 401-1033 420-833 788-1026 925-1019 796-869 407-567 640-734 795-887 921-1021 564-876 397-548 6-93 316-579 554-879 135-147 156-187 232-243 458-470 153-192 913-947 2xauA(88-733) 8e-172 51.38% 4cbgA(5-364) 5e-60 19.29% 3i4uA(2-238) 1e-27 44.77% PF07717(12-109) 2e-14 38.78% PF04408(2-74) 3e-13 51.35% PF00270 2.2e-06 2.8% PF00271 1.9e-13 55.3% PF04408 2.7e-28 104.6% PF07717 1.2e-33 122.4% 1hrkA(37-355) 3e-52 7.74% 1q1lA(29-198) 1e-22 14.62% 1mp1A(25-111) 2e-12 14.77% c.37.1 1.1e-39 128.0% c.37.1 2e-66 214.2%

Sequence

MGSNDLNTWVSDKLMVLLGFSQTAVVQYLIAMAKQSKSPGELVRELVECGFSLSGDTRAF
AEEIYARAPRKTPGVNLYQQQEAEAAMLLKKQKTFSLLEADHDEDENNVKKQSASKTGKS
DKGQKRFRKKSEQLEDDDDEVVIVREDKRNVRRKVSEDEDDGTESEEERLRDQREREELE
QHLRERDTARTRKLTEPKMSKKEQEEFVRRDSAVDKGDIESLRKFSWQEYMKKRKQKKVL
ELKDDIEDEPYLFGDEKLTEREIREFRYKREIYELIKKSTQEEDNVGEYRMPDAYDQQGS
VDQEKRFAVSVQRYRDMGSAEKMNPFAEQEAWEDHQIENAALKFGAKNKEVSDNYEFVFE
DQIDFIKASVLAGDNYEDEMHAKPSQDSAGKSAFHMLQEDRKALPIYTYRDQLLNAVKDH
QVLIIVGETGSGKTTQIPQYLHEAGYTKLGKVGCTQPRRVAAMSVAARVAQEMGGKLGHE
VGYSIRFEDCTSEKTILKYMTDGMLLRELLGEPDLGSYSVIIVDEAHERTLRTDILFGLV
KDIARARPDLKLLISSATMDAEKFSDFFDQAPIFRFPGRRYPVDICFTTAPEADYMDAAI
TTVLTIHVKEPLGDVLVFLPGQEEIEAVEENLKHKIRGLGTKIRELIICPIYANLPSELQ
AKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLVTPISK
ASATQRTGRAGRTSPGKCYRLYTAFNYYNDLEDNTVPEIQRTNLASVVLSLKSLGIHNLL
NFDFMDPPPSEALIKSLELLFALGALNQLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKC
SDEIISIAAMLSIGPSIFYRPKDKQVHADNAMKNFHVGNVGDHIAFLKIYNSWKETNYST
QWCYENYIQVRSMKRARDIRDQLEGLLERVEIDVSSNANELDSIRKSIVAGFFPHTAKLQ
KNGSYRTVKHPQTVHIHPASGLSQVLPRWVVYHQLVLTSKEYMRQVTELKPEWLIEIAPH
YYQLKDVEDATSKKMPKTSGRAVV

Region:1-1044
Length:1044aa
Label:Full sequence
Reset:click