Input sequence

Protein name Nucleoprotein TPR
Organism Rattus norvegicus Length 2360
Disorder content 43.5% ProS content 13.8%
IDEAL NA UniProt F1MA98

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil 0 2360 1-32 33-40 41-46 47-172 173-179 180-207 208-211 212-281 282-288 289-373 374-401 402-513 514-542 543-610 611-664 665-808 809-826 827-884 885-886 887-921 922-926 927-975 976-986 987-1123 1124-1127 1128-1176 1177-1194 1195-1198 1199-1206 1207-1345 1346-1353 1354-1423 1424-1474 1475-1551 1552-1555 1556-1629 1630-2360 33-40 47-172 180-207 212-281 289-373 402-513 543-610 665-808 827-884 887-921 927-975 987-1123 1128-1176 1195-1198 1207-1345 1354-1423 1475-1551 1556-1629 1-32 41-46 173-179 208-211 282-288 374-401 514-542 611-664 809-826 885-886 922-926 976-986 1124-1127 1177-1194 1199-1206 1346-1353 1424-1474 1552-1555 1630-2360 1-32 41-46 173-179 208-211 282-288 386-401 514-517 530-542 611-623 809-826 885-886 976-986 1124-1127 1199-1206 1346-1353 1424-1455 1552-1555 1630-1641 1939-1945 2112-2115 2126-2165 2178-2199 2207-2215 2259-2269 2295-2299 2335-2360 1250-1454 932-1188 49-304 834-999 1469-1546 1277-1607 1026-1417 11-316 201-512 892-1557 2-155 29-511 1032-1279 241-359 939-1055 179-190 339-354 518-534 558-572 653-668 690-703 782-795 811-826 1003-1019 1222-1239 1611-1627 1698-1720 1760-1780 1923-1936 1945-1984 1992-2017 2062-2081 2242-2254 2295-2317 2349-2360 47-172 180-207 212-281 289-373 420-513 543-610 665-808 827-868 887-921 927-975 987-1123 1128-1176 1207-1345 1354-1423 1475-1551 1556-1629 4tkoB(44-245) 2e-08 27.14% 1c1gA(20-280) 3e-06 20.0% 1c1gA(24-282) 4e-06 22.68% 4tqlA(75-221) 0.0001 21.08% 3ni0A(17-95) 0.0004 30.38% 4rh7A(1604-1938) 5e-10 12.87% 4rh7A(1599-1967) 3e-07 14.5% 4rh7A(1610-1919) 8e-07 16.4% 4rh7A(1606-1932) 5e-06 13.35% PF12128(231-909) 6e-12 20.34% PF07888(136-300) 0.0004 31.74% PF05557(17-495) 0.0004 24.01% PF07926 8.6e-102 348.8% a.7.1 0.00028 15.2% a.2.5 2.2e-06 24.9%

Sequence

MAAVLQQVLERPELNKLPKSTQNKLEKFLAEQQSEIDCLKGRHEKFKVESEQQYFEIEKR
LSQSQERLVNETRECQNLRLELEKLNNQVKVLTEKNKELETAQDRNLGIQSQFTRAKEEL
EAEKRDLIRTNERLSQEVEYLTEDVKRLNEKLKESNTTKGELQLKLDELQASDVTVKYRE
KRLEQEKELLHNQNSWLNTELKTKTDELLALGREKGNEILELKCTLENKKEEVLRLEEQM
NGLKTSNEHLQKHVEDLLTKLKEAKEQQASMEEKFHNELNAHIKLSNLYKSAADDSEAKS
NELTRAVDELHKLLKEAGEANKTIQDHLLQVEESKDQMEKEMLEKIGKLEKELENANDLL
SATKRKGAILSEEELAAMSPTAAAVAKIVKPGMKLTELYNAYVETQDQLLLEKLENKRIN
KYLDEIVKEVEAKAPILKRQREEYERAQKAVASLSAKLEQAMKEIQRLQEDTDKANKHSS
VLERDNQRMEIQIKDLSQQIRVLLMELEEARGNHVIRDEEVSSADISSSSEVISQHLVSY
RNIEELQQQNQRLLFALRELGETREREEQETTSSKIAELQNKLENSLTELEQLRESRQHQ
MQLVDSIVRQRDMYRILLSQTTGMAIPLQASSLDDISLVSTPKRSSTSQTVSTPAPEPII
ESTETIEAKAALKQLQEIFENYKKEKMDSEKLQNEQLEKLQEQVTDLRSQNTKISTQLDF
ASKRYEMLQDNVEGYRREITSLQERNQKLTATTQKQEQIINTMTQDLRGANEKLAVAEVR
AENLKKEKEMLKLSEVRLSQQRESLLAEQRGQNLLLTNLQTIQGILERSETETKQRLSSQ
IEKLEHEISHLKKKLENEVEQRHTLTRNLDVQLLDTKRQLDTEINLHLNTKELLKNAQKD
IATLKQHLNNMEAQLASQSTQRTGKGQPGDRDDVDDLKSQLRQAEEQVNDLKERLKTSAS
NVEQYRAMVTSLEDSLNKEKQVTEEVHKNIEVRLKESAEFQTQLEKKLMEVEKEKQELQD
DKRKAIESMEQQLTELKKTLSSVQSEVQEALQRASTALSNEQQARRDCQEQAKIAVEAQN
KYERELMLHAADVEALQAAKEQVSKMASVRQHLEETTQKAESQLLECKASWEERERVLKD
EVSKSVSRCEDLEKQNRLLHDQIEKLSDKVVTSMKEVVQSPLNISLNEEGKSQEQILEIL
RFIRREKEIAETRFEVAQVESLRYRQRVELLERELQELQDSLNAEREKVQVTAKTMAQHE
ELMKKTETMNVVMETNKMLREEKERLEQNLQQMQAKVRKLELDILPLQEANAELSEKSGM
LQAEKKLLEEDVKRWKARNQHLINQQKDPDTEEYRKLLSEKEIHTKRIQQLNEEVGRLKA
EIARSNASLTNNQNLIQSLKEDLSKVRTEKESIQKDLDAKIIDIQEKVKTITQVKKIGRR
YKTQFEELKAQQKAMETSTQSSGDHQEQHISVQEMQELKDNLSQSETKTKSLEGQVENLQ
KTLSEKETEARSLQEQTAQLQSELSRLRQELQDKTTKEEQLRQQMNEKDEKTWKAITVAR
SKIAHLSGVKDQLTKENEELKQRNGALDQQKDELDVRMTALKSQYEGRISRLERELREHQ
ERHLEQRDEPQEPTNKAPEQQRQITLKTTPASGERGIASTSDPPTANIKPTPVVSTPSKV
TAAAMAGNKSTPRASIRPMVTPATVTNPTTTPTATVMPTTQVESQEAMQSEGPVEHVPVF
GSTSGSVRSTSPNVQPSISQPLLTVQQQTQATAFVQPTQQSHPQIEPANQELSPNIVEVV
QSSPVERPSTSTAVFGTVSATPSSSLPKRAREEEEDSTIEAGDQVSDDTVEMPLPKKLKT
VTPVGTEEEVMAEESTDGEAETQTYNQDSQDSIGEGVTQGDYTPMEDSEETSQSLQIDLG
PLQSDQQTTSSQDGQGKGDDVIVIDSDDEDDDEENDGEHEDYEEDEDEDDDEEDDTGMGD
EGEDSNEGTGSADGNDGYEADDAEGGDGTDPGTETEESMGGAESNQRAADSQNSGEGNTS
AAESSFSQEVAREQQPTSASERQTPQAPQSPRRPPHPLPPRLTIHAPPQELGPPVQRIQM
TRRQSVGRGLQLTPGIGGMQQHFFDDEDRTVPSTPTLVVPHRTDGFAEAIHSPQVAGVPR
FRFGPPEDMPQTSSSHSDLGQLASQGGLGMYETPLFLAHEEESGGRSVPTTPLQVAAPVT
VFTESTTSDASEHASQSVPMVTTSTGTLSTTNETPAGDDGDEVFVETESEGISSEAGLEI
DSQQEEEPVQASDESDLPSTSQDPPSSSSVDTSSSQPKPFRRVRLQTTLRQGVRGRQFNR
QRGISHAMGGRGGINRGNIN

Region:1-2360
Length:2360aa
Label:Full sequence
Reset:click