Input sequence

Protein name Protocadherin-16
Organism Rattus norvegicus Length 3291
Disorder content 9.2% ProS content 7.9%
IDEAL NA UniProt D4ACX8

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 3291 1-1320 1321-1326 1327-2875 2876-2880 2881-2954 2955-3143 3144-3177 3178-3291 1-1320 1327-2875 2881-2954 3144-3177 2955-3143 3178-3291 2955-3086 3097-3119 3124-3143 3178-3183 3190-3210 3227-3269 3277-3291 1358-1795 476-982 819-1305 174-592 2273-2717 1650-1943 2099-2360 2534-2782 1858-2139 1191-1467 2708-2859 120-223 1545-2049 476-982 144-670 2070-2585 785-1305 1217-1734 2391-2796 1869-2262 2497-2913 43-242 476-562 1653-1734 1854-1943 1106-1196 1216-1306 1547-1633 1749-1830 894-974 2602-2674 687-775 2482-2586 2173-2261 2072-2144 258-346 2704-2797 2380-2463 369-456 792-876 144-240 580-657 41-128 142-240 254-347 365-457 472-563 577-670 684-775 789-879 893-983 999-1090 1104-1196 1216-1306 1434-1530 1543-1633 1647-1735 1749-1839 1853-1944 2066-2155 2169-2261 2274-2360 2374-2466 2480-2586 2600-2690 2704-2797 2811-2916 206-603 1585-2001 2213-2649 515-942 831-1259 1895-2300 2551-2866 1413-1707 44-318 1224-1388 35-129 130-241 243-348 350-458 460-564 566-671 673-774 783-880 882-984 991-1092 1093-1197 1199-1307 1328-1422 1423-1531 1533-1634 1635-1736 1738-1840 1842-1945 1941-2048 2060-2156 2158-2262 2264-2361 2363-2467 2469-2587 2588-2691 2692-2798 2794-2917 17-33 99-110 605-620 948-957 1167-1178 1323-1335 1433-1444 1831-1839 1957-1965 2867-2887 2920-2959 3001-3017 3046-3055 3088-3097 3185-3196 3237-3259 2932-2954 3q2wA(34-482) 4e-35 30.84% 3q2wA(4-540) 2e-28 24.63% 3q2wA(37-540) 2e-24 24.95% 3q2vA(36-476) 1e-25 28.1% 1l3wA(6-457) 2e-24 27.23% 2a62A(9-318) 3e-21 31.01% 2a62A(38-319) 3e-21 32.89% 2a62A(41-295) 5e-20 30.3% 2a62A(16-293) 3e-08 25.51% 3ubhA(90-353) 4e-10 27.56% 2wcpA(20-163) 1e-09 31.61% 2wcpA(93-187) 0.001 30.77% 3q2wA(7-538) 8e-75 26.7% 3q2wA(4-540) 1e-70 23.62% 3q2wA(7-541) 5e-69 23.92% 3q2wA(9-540) 6e-65 23.55% 3q2wA(1-540) 1e-61 21.94% 3q2wA(6-540) 2e-55 20.51% 3ubhA(9-407) 1e-51 22.9% 3ubhA(8-409) 3e-44 25.12% 3ubhA(9-407) 9e-40 19.86% 2wcpA(18-207) 3e-19 25.6% PF00028(5-91) 1e-12 54.02% PF00028(7-91) 1e-12 55.29% PF00028(2-91) 3e-11 49.45% PF00028(3-92) 3e-11 56.04% PF00028(1-92) 1e-10 45.65% PF00028(5-92) 3e-10 44.32% PF00028(1-83) 1e-09 43.37% PF00028(2-83) 3e-09 48.78% PF00028(3-75) 6e-09 47.95% PF00028(4-92) 1e-08 40.45% PF00028(3-92) 2e-08 41.9% PF00028(5-92) 3e-08 44.94% PF00028(7-78) 6e-08 52.7% PF00028(5-91) 2e-07 46.07% PF00028(1-90) 7e-07 40.62% PF00028(7-89) 6e-05 40.7% PF00028(5-91) 0.0005 37.5% PF00028(4-89) 0.0007 38.37% PF00028(3-92) 0.001 34.02% PF00028(4-77) 0.001 50.0% PF00028 0.00099 23.0% PF00028 4.4e-10 44.1% PF00028 2.4e-22 84.9% PF00028 3.4e-15 61.1% PF00028 4.6e-25 93.9% PF00028 3e-17 67.9% PF00028 1e-16 66.1% PF00028 5.4e-12 50.5% PF00028 1.2e-20 79.2% PF00028 3.1e-16 64.5% PF00028 2.1e-32 118.3% PF00028 5.4e-23 87.0% PF00028 2.5e-10 44.9% PF00028 3.4e-31 114.2% PF00028 4.6e-29 107.2% PF00028 4.1e-24 90.7% PF00028 8.9e-30 109.5% PF00028 2.4e-14 58.3% PF00028 1.3e-21 82.4% PF00028 6.2e-12 50.3% PF00028 4.5e-13 54.0% PF00028 1.7e-20 78.7% PF00028 3.2e-23 87.7% PF00028 2.2e-18 71.7% PF00028 1.9e-08 38.6% 1dnvA(15-389) 2e-58 6.42% 1dnvA(6-402) 6e-53 6.98% 1dnvA(6-412) 1e-52 7.64% 1dnvA(6-414) 2e-39 9.34% 1dnvA(6-410) 4e-36 6.56% 1dnvA(6-389) 1e-33 5.73% 1dnvA(14-316) 3e-33 8.15% 2nlzA1(242-529) 3e-37 8.47% 2nlzA1(266-528) 5e-18 10.03% 1f15A(3-156) 1e-17 13.69% b.1.6 4.2e-11 38.8% b.1.6 2.3e-21 76.3% b.1.6 4.2e-30 104.9% b.1.6 3.2e-21 74.3% b.1.6 2.7e-29 102.1% b.1.6 1.7e-25 89.1% b.1.6 6.7e-23 80.1% b.1.6 8.6e-19 64.7% b.1.6 6.9e-26 90.4% b.1.6 1.2e-18 66.6% b.1.6 2.1e-31 109.4% b.1.6 2.7e-23 81.5% b.1.6 8.9e-09 31.0% b.1.6 1.1e-20 72.5% b.1.6 4.4e-28 97.9% b.1.6 7.3e-32 112.9% b.1.6 3.2e-27 95.0% b.1.6 1.8e-29 102.7% b.1.6 7.4e-15 51.7% b.1.6 3.9e-17 59.1% b.1.6 7.9e-29 100.5% b.1.6 2.4e-20 71.3% b.1.6 1.2e-24 86.1% b.1.6 1.5e-25 89.2% b.1.6 2.7e-29 104.0% b.1.6 5.9e-24 85.3% b.1.6 2.3e-14 50.0%

Sequence

MQEELSVALSCPGMKSLGTLLPLLVLLGTTVPGIRGQAGSLDLQIDEEQPAGTLIGDISA
GLPPGTAPPPMYFISAQEGSGVGTDLDIDEHSGVVCTARVLDRERRDRYRFTAVTPDGAT
VEVTVRVADINDHAPAFPQARAALQIPEHTALGTRYPLEPAHDADAGRLGTQGYALSGDG
AGETFRLETRPGPGGAPVPELVIAGELDRENRSHYMLQLEAYDGGSPPRRAQALLDVTLL
DINDHAPAFNQSRYHAVVSESLAPGSPVLQVFASDADAGANGAVTYEINRRQSEGDGPFS
IDAHTGFLKLERPLDFEQRRVHELVVQARDGGAHPELGSAFVTVHVRDANDNQPSMTVIF
LSADGSPRVSEAAPPGQLVARISVSDPDDGDFAHVNVSLEGGEGHFALSTQDSVIYLVCV
ARRLDREERDVYNLRVTATDSGSPPLRAEAAFVLHVTDVNDNAPAFDRQLYRPEPLPEVA
LPGSFVVRVTARDPDQGTNGQVTYSLAPGTHTHWFSIDPTSGIITTAATLDYELEPQPQL
IVVATDGGLPPLVSSATVSVALQDVNDNEPQFQRTFYNASLPEGTQPGTCFLQVTATDAD
SGPFGLLSYSLGAGLGASGSPPFRIDAHSGEVCTTRILDRDQGPSSFDFTVTAIDGGGLK
SMVYVKVFVADENDNPPQFYPREYAASLSAQSTPGTAVLRVHAHDPDQGPHGRLSYHILA
GNSPPLFALDAHSGLLTVAWPLGRRANSVVQLEIGAQDGGGLQAEPIARVNISIVPGTPT
PPIFEQLQYVFSVPEDVAPGTSVGVVQAHNPPGRLGPVTLTLSGGDPRGLFSLDSASGLL
KTLRPLDRELLGPVLELEVRAGSGTPPVFSAARIRVLLDDVNDNSPAFPAPEDTVLLPQN
TAPGTPVYTLRALDPDSGANSRVTFSLLAGGDGLFTVDPTTGHVRLMGPLGPPGGPPHEL
EVEAQDGGSPPRTSHFRLRVVIQDLGIHGLAPRFDSPTYRVDLPSGTTTGTQILQVQAQA
PDGSPVTYHLAADGASNPFGLESQSGWLWVRAALDRESQELYTLKVMAVSGSKAELGQQT
GTATVRVVILNQNDHSPRLSEEPTFLAVAENQPPGTSVGRVFATDKDSGPNGRLTYSLQQ
LSEDSKAFRIHPQTGEVTTLQTLDREQQSSFQLLVQVQDAGSPPRSATGTVHVAVLDLND
NSPTFLQASGAAGGGLPIQVPDRVPPGTLVTTLQAKDPDEGENGTILYTLTGSGSELFSL
HPHTGELHTAASLIRAERPHYVLTLSAHDQGSPPRSASLQLLVQVLPSTRMVESPDLVEA
DSAATVPVVLTVTAAEGLRPGSLLGSVAPQEPASMGVLTYTLVGGADPEGTFALDSASGR
LYLARVLDFESGPAWRALTVRAEGPGGAGARLMRVQVRVQDENEHAPAFARDPLALALPE
NPEPGATLYTFRASDADGPGPNSDVRYRLLRQEPPVPALRLDARTGALSAPRGLDRETTP
ALLLIVEATDRPANASRRKATRVSARVFVTDENDNAPVFASPSRMRLPEDQPPGPAALHV
VARDPDLGEAARVSYRLAAGGDGHFRLHATTGALSVVRPLDREQRAEHVLTVVASDHGSP
PRSSTQLLTVSVVDVNDEAPAFPQQEYNVILRENSPPGTSLLTLKATDPDLGANGQVTYG
GVSGESFSLDPNSGVLTTLRALDREEQEEINLTVYARDRGLPPLLTHITVRVTVEDENDH
SPTFGNTHLSLEVPEGQDPQTLTTLRASDPDGGLNGQLQYRILGGDPSGAFALDLTSGEF
GTTRPLDREVEPAFQLQIEARDGGQPALSATLLVTVTVLDANDHAPAFPVPSYSVEVPED
APVGTLLLQLQAHDPDEGDNGRVMYYLGAGTAGAFLLEPTSGELSTATALDREHCASYAF
SVTAVDGAAAGPLSTTVPITVTVRDVNDHAPAFPTSPLRLRLPRPGPSLNKPTLALATLR
AEDRDAGANASILYRLAGTPPPGTTVDSYTGEIRVARSPAALGPRDRVLFIVATDLGRPA
RSATGVVIVGIQGEPERGPRFPRANNEAVLRENAPPGTPVISPKAVHSGGSNGPITYSIL
SGNERGIFSIQPSTGTITVQSAEGLDFETNPRLRLVLQAESGGAFAFSVLTLTLQDANDN
APRFLQPHYVAFLPESRPLEGPLLQVEADDLDQGSGGQISYSLAASQPARGLFHVDPATG
TITTTAILDREIWAETRLVLMATDRGSPALVGSATLTVMVIDTNDNRPTIPQPWELRVSE
DALLGSEIAQVTGNDVDSGPVLWYVLSPSGPQDPFSIGRYGGRVSLTGPLDFEQCDHYHL
QLLAHDGPHEGHANLTVLVEDVNDNVPIFSQSLYQVMMLEHTPPGSAILSVSATDRDSGA
NGHISYHLASPAEGFSVDTNNGTLFTTVGAMALGHEGPGVVDVVLEARDHGAPGRSAQAT
VHVQLKDQNDHAPSFTLPHYRVAVSEDLPPGSTLLTLEAIDADGSRSHATVDYSIISGNR
GRVFQLEPRLAEVGDGVGPGPQALGCLVLLEPLDFESLTQYNLTVTAADRGQPPRSSAVP
VTVTVLDVNDNPPVFTRASYRVTVPEDMPVGAELLHVEASDADPGPHGLVHFTLSSGDPL
GLFELDENSGALRLAHPLDCETQAQHQLVVQAADPAGTHFALVPVTVEVQDVNDHGPAFP
LSLLSTSLAENQPPGTLVTTLHAMDGDAGTFGRLRYTLLEAVPGPEGREAFSLNSSTGEL
RARVPFDYEHTGSFRLLVGAADAGNLSASVTVSVLITGEDEYDPVFLAPSFHFQVPEGAQ
RGHSLGHVQATDEDGGADGLVLYSLATSSPYFGINQTTGALYLRVDSRAPGSGTATSGGG
GRTRREAPRELRLEVVARGPLPGSRSATVPVTVDITHTALGLAPDLNLLLVGAVAASLGV
VVVLALAALVLGLVRARSRKAEAAPGPMSQTAPIASSSLQKLGREPPSPPPSEHLYHQTL
PSYGGPGAGGPYPRGGSLDPSHSSGRGSAEAAEDDEIRMINEFPRVASVASSLAARGPDS
GIQQDADGLSDTSCEPPAPDTWYKGRKAGLLLPGAGATLYREEGPPATATAFLGGCGLSP
APTGDYGFPADGKPCVAGALTAIVAGEEELRGSYNWDYLLSWCPQFQPLASVFTEIARLK
DEARPCPPAPRIDPPPLITAVAHPGAKSVPPKPASTAATRAIFPPASHRSPISHEGSLSS
AAMSPSFSPSLSPLAARSPVVSPFGVAQGPSASALSTESGLEPPDDTELRI

Region:1-3291
Length:3291aa
Label:Full sequence
Reset:click