Input sequence

Protein name Semaphorin-5A
Organism Rattus norvegicus Length 1074
Disorder content 8.5% ProS content 8.5%
IDEAL NA UniProt D3ZTD8

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 1074 1-20 21-26 27-350 351-362 363-517 518-567 568-764 765-773 774-1074 27-350 363-517 568-764 774-1074 1-20 351-362 518-567 765-773 1-20 351-362 518-567 765-773 68-529 784-895 540-646 612-701 856-940 38-490 781-835 656-702 899-940 538-676 487-584 61-461 790-838 659-701 58-468 486-533 599-650 657-701 788-838 845-895 900-945 36-484 784-834 656-699 898-940 856-892 541-690 447-576 32-485 486-540 539-592 594-647 649-701 780-838 840-893 895-943 598-611 707-715 755-771 844-854 949-960 971-993 3afcA(40-523) 2e-82 38.09% 1lslA(2-113) 3e-23 46.43% 1lslA(2-110) 2e-16 46.43% 1lslA(19-113) 3e-15 39.58% 1lslA(17-108) 3e-10 36.96% 1q47A(9-484) 2e-68 31.42% 4v2aA(197-248) 3e-08 36.36% 1vexA(7-56) 4e-06 26.0% 1vexA(7-50) 0.0006 31.11% 1vmoA(12-143) 1e-06 21.99% 3ojyB(412-500) 0.0003 20.41% PF01403(3-412) 7e-101 49.17% PF00090(3-50) 1e-05 46.94% PF00090(3-50) 0.0007 43.75% PF01403 4.2e-206 695.3% PF01437 2.4e-14 58.3% PF00090 6.1e-15 60.2% PF00090 6.7e-07 33.5% PF00090 1.9e-13 55.3% PF00090 3.1e-11 47.9% PF00090 1.7e-06 32.2% 1olzA2(5-473) 5e-124 32.01% 1lslA1(2-52) 3e-13 43.14% 1lslA1(5-54) 7e-07 32.0% 1lslA1(4-51) 4e-06 35.42% 1lslA1(17-53) 1e-05 37.84% 1vmoA(15-155) 1e-11 21.12% 2giyA1(21-163) 4e-05 6.94% b.69.12 6.2e-148 461.8% g.16.2 7.3e-15 47.5% g.60.1 6.8e-11 33.3% g.60.1 2.3e-19 58.5% g.60.1 4.8e-14 43.5% g.60.1 3.9e-20 62.0% g.60.1 1.1e-21 65.5% g.60.1 3.4e-11 34.2%

Sequence

MKGACILAWLFSSLGVWRLARPETQDPAKCQRAEHPVVSYKEIGPWLREFRAENAVDFSR
LTFDPGQKELVVGARNYLFRLQLEDLSLIQAVQWECDEATKKACYSKGKSKEECQNYIRV
LLVGGDRLFTCGTNAFTPVCTIRSLSNLTEIHDQISGMARCPYSPQHNSTALLTASGELY
AATAMDFPGRDPAIYRSLGTLPPLRTAQYNSKWLNEPNFVSSYDIGNFTYFFFRENAVEH
DCGKTVFSRAARVCKNDIGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQSTFFLPEL
DLIYGIFTTNVNSIAASAVCVFNLSAISQAFNGPFKYQENSRSAWLPYPNPNPNFQCGTM
DQGLYVNLTERNLQDAQKFILMHEVVQPVTTVPSFMEDNSRFSHVAVDVVQGRDTLVHII
YLATDYGTIKKVRAPLSQSSGSCLLEEIELFPERKSEPIRSLKILHSQSVLFVGLQEHVV
KIPLKRCHFHQTRGACIGAQDPYCGWDAVMKKCTSLEESLSMTQWDQSVPTCPTRNLTVD
GSFGPWSPWTPCTHTDGTAVGSCLCRSRSCDSPAPQCGGWQCEGPRMEITNCSRNGGWTP
WTSWSPCSTTCGIGFQVRQRSCSNPTPRHGGRVCVGQNREERYCNEHLLCPPHVFWTGWG
PWERCTAQCGGGIQARRRTCENGPDCAGCNVEYQPCNTNACPELKKTTPWTPWTPVNISD
NGGHYEQRFRYTCKARLPDPNLLEVGRQRIEMRYCSSDGTSGCSTDGLSGDFLRAGRYSA
HTVNGAWSAWTSWSQCSRDCSRGIRNRKRVCNNPEPKYGGMPCLGPSLEFQECNILPCPV
DGVWSCWSSWSKCSATCGGGHYMRTRSCTNPAPAYGGDICLGLHTEEALCNTQTCPENWS
EWSEWSVCDASGTQVRTRQCILLFPVGSQCSGNTTESRPCVFDSNFIPEVSVARSSSVEE
KRCGEFNMFHMMAVGLSSSILGCLLTLLVYTYCQRYQQQSHDATVIHPVSPAALNSSITN
HINKLDKYDSVEAIKAFNKNNLILEERNKYFNPHLTGKTYSNAYFTDLNNYDEY

Region:1-1074
Length:1074aa
Label:Full sequence
Reset:click