Input sequence

Protein name Protocadherin-8
Organism Rattus norvegicus Length 1069
Disorder content 25.1% ProS content 16.7%
IDEAL NA UniProt D3ZE55

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 1069 1-26 27-358 359-364 365-392 393-397 398-714 715-723 724-740 741-770 771-886 887-894 895-940 941-970 971-987 988-1051 1052-1069 27-358 398-714 741-770 887-894 941-970 988-1051 1-26 365-392 724-740 771-886 895-940 971-987 1052-1069 1-26 771-793 800-821 845-850 855-872 881-886 895-940 971-987 1056-1069 455-654 239-352 403-495 121-237 25-135 141-700 34-237 32-109 504-600 253-344 401-487 140-236 30-112 140-236 251-345 397-488 502-600 619-711 202-648 603-700 129-243 80-177 1-100 26-128 129-237 233-352 395-490 491-601 603-712 264-274 360-391 701-725 759-771 782-802 828-860 909-932 973-979 748-770 2a62A(63-255) 2e-16 31.88% 2ystA(8-119) 7e-13 42.11% 2ystA(25-119) 0.0008 28.42% 2wcpA(96-206) 1e-07 34.75% 1wyjA(6-115) 6e-13 37.17% 3q2wA(6-530) 2e-59 20.1% 2wcpA(14-206) 2e-23 26.19% PF08266(3-81) 9e-11 45.0% PF00028(3-92) 4e-09 46.39% PF00028(3-91) 0.0001 38.04% PF00028(5-91) 0.0002 36.78% PF00028(1-92) 0.0003 32.99% PF08266 2.5e-08 27.6% PF00028 1.4e-10 45.8% PF00028 2.7e-21 81.3% PF00028 1.3e-12 52.5% PF00028 9.4e-20 76.2% PF00028 3.3e-14 57.8% 1dnvA(15-392) 8e-58 6.37% 1edhA2(1-100) 5e-09 20.95% 1l3wA5(1-104) 3e-16 13.04% 1fx3A(38-125) 0.0008 7.14% 1f5aA1(24-118) 3e-12 17.0% b.1.6 5.5e-09 33.9% b.1.6 4.2e-23 80.8% b.1.6 1.5e-25 88.3% b.1.6 3.2e-17 59.5% b.1.6 4.1e-30 104.9% b.1.6 4.3e-17 60.2%

Sequence

MSPVKRWGSPCLFPLQLFSLCWVLSVAQSKTVRYSTFEEDAPGTVIGTLAEDLHMKVSGD
TSFRLMKQFNSSLLRVREGDGQLTVGDAGLDRERLCGQSPQCVLAFDVVSFSQEQFRLVH
VEVEVRDVNDHAPRFPRAQIPVEVSESAPVGTRIPLEVPVDEDVGANGLQSVRLAEPHSP
FRVELQTRADGAQCADLVLLQELDRESQASYSLELVAQDGGRPPRSATAALSVRVLDAND
HSPAFPQGAVAEVELAEDAPVGSLLLDLDAADPDEGPNGDVVFTFGARTPPEARHLFRLD
PRSGRLTLAGQVDYERQDTYELDVRAQDRGPGPRTATCKVIVRIRDVNDNAPDISITPLA
APGAPATSPFAAAAAAAALGGADAASSAGSGTQETGVTSLVPEGAARESLVALVSTSDRD
SGANGQVRCALYGHEHFRLQPAYAGSYLVVTAASLDRERIAEYNLTLVAEDRGAPPLRTV
RPYTVRVGDENDNAPLFTKPVYEVSVRENNPPGAYLATVAARDPDLGRNGQVTYRLVEAE
VGRSGEAVSTYVSVDPATGAIYALRSFDYETLRQLDVRVQASDGGSPQLSSNALVQVRVL
DQNDHSPVLVHPAPANGSLEVAVPGRSTKDTAVARIQARDADEGANGELAFDLLQQEPRE
AFSIGRHTGEIVLTGDLSQEPPGRVFKALLVISDGGRPPLTTTATVSFVVTAGGGSAVPA
SAGSPEHFRPPGSRLAPSGPSLQWDTPLIVIIVLAGSCTLLLAAIIAIATTCNRRKKEVR
KGGALREERPGAAGGGASAPGSPDETARGTGPRPNMFDVLTFPGSGKAPFGSPAADAPPP
AVAAAEVPGSEGGSATGESACHFEGQQRLRGAHAEPYSASPGFGKEPAPPVAVWKGHSFN
TISGREAEKFSGKDSGKGDSDFNDSDSDISGDALKKDLINHMQSGLWACTAECKILGHSD
RCWSPSCAGPNTHPPPHPPAQMSTFCKSTSLPRDPLRRDNYYQAQLPKTVGLQSVYEKVL
HRDYDRTVTLLSPPRPGRLPDLQEIGVPLYESPPGGRYVSPKKGTNENV

Region:1-1069
Length:1069aa
Label:Full sequence
Reset:click