Input sequence

Protein name Pre-mRNA-processing protein 40A
Organism Arabidopsis thaliana Length 958
Disorder content 52.0% ProS content 15.4%
IDEAL NA UniProt B6EUA9

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil 0 958 1-397 398-857 858-958 398-857 1-397 858-958 1-3 12-16 189-218 229-264 282-286 378-387 862-879 914-918 923-958 188-260 403-455 401-582 186-258 610-678 744-803 186-215 227-256 406-455 473-523 189-268 409-456 183-219 216-261 393-461 463-527 528-596 735-804 40-58 284-291 295-315 458-477 482-492 528-538 588-607 736-742 804-857 868-889 892-912 448-491 525-552 587-618 736-763 799-857 2l5fA(14-86) 6e-19 54.79% 1uzcA(11-63) 4e-10 56.6% 4fqgA(2-173) 2e-13 21.65% 2jxwA(3-75) 7e-12 38.36% 2doeA(13-74) 0.0003 26.09% 2doeA(14-72) 0.0004 23.33% PF00397 6.7e-11 46.8% PF00397 4.1e-08 37.6% PF01846 7.8e-13 53.2% PF01846 3.7e-10 44.4% 1pu1A(2-84) 4e-08 7.23% 2cqnA1(6-55) 1e-05 26.0% b.72.1 4.1e-09 37.2% b.72.1 3.7e-09 40.7% a.159.2 5.1e-18 65.3% a.159.2 7e-16 57.6% a.159.2 2.8e-07 26.9% a.159.2 1.5e-11 42.2%

Sequence

MANNPPQSSGTQFRPMVPGQQGQHFVPAASQPFHPYGHVPPNVQSQPPQYSQPIQQQQLF
PVRPGQPVHITSSSQAVSVPYIQTNKILTSGSTQPQPNAPPMTGFATSGPPFSSPYTFVP
SSYPQQQPTSLVQPNSQMHVAGVPPAANTWPVPVNQSTSLVSPVQQTGQQTPVAVSTDPG
NLTPQSASDWQEHTSADGRKYYYNKRTKQSNWEKPLELMTPLERADASTVWKEFTTPEGK
KYYYNKVTKESKWTIPEDLKLAREQAQLASEKTSLSEAGSTPLSHHAASSSDLAVSTVTS
VVPSTSSALTGHSSSPIQAGLAVPVTRPPSVAPVTPTSGAISDTEATTIKGDNLSSRGAD
DSNDGATAQNNEAENKEMSVNGKANLSPAGDKANVEEPMVYATKQEAKAAFKSLLESVNV
HSDWTWEQTLKEIVHDKRYGALRTLGERKQAFNEYLGQRKKVEAEERRRRQKKAREEFVK
MLEECEELSSSLKWSKAMSLFENDQRFKAVDRPRDREDLFDNYIVELERKEREKAAEEHR
QYMADYRKFLETCDYIKAGTQWRKIQDRLEDDDRCSCLEKIDRLIGFEEYILDLEKEEEE
LKRVEKEHVRRAERKNRDAFRTLLEEHVAAGILTAKTYWLDYCIELKDLPQYQAVASNTS
GSTPKDLFEDVTEELEKQYHEDKSYVKDAMKSRKISMVSSWLFEDFKSAISEDLSTQQIS
DINLKLIYDDLVGRVKEKEEKEARKLQRLAEEFTNLLHTFKEITVASNWEDSKQLVEESQ
EYRSIGDESVSQGLFEEYITSLQEKAKEKERKRDEEKVRKEKERDEKEKRKDKDKERREK
EREREKEKGKERSKREESDGETAMDVSEGHKDEKRKGKDRDRKHRRRHHNNSDEDVSSDR
DDRDESKKSSRKHGNDRKKSRKHANSPESESENRHKRQKKESSRRSGNDELEDGEVGE

Region:1-958
Length:958aa
Label:Full sequence
Reset:click