Input sequence

Protein name LIM domain-containing protein 1
Organism Rattus norvegicus Length 663
Disorder content 63.5% ProS content 10.1%
IDEAL NA UniProt B5DEH0

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR 0 663 1-43 44-452 453-651 652-663 1-43 453-651 44-452 652-663 44-57 72-83 94-99 142-151 172-177 183-188 435-447 522-581 457-511 584-654 517-586 459-512 581-656 357-466 459-517 524-581 584-650 564-615 487-550 442-485 486-548 549-621 57-67 2dloA(16-75) 1e-16 51.67% 1rutX(67-122) 7e-08 39.29% 1x61A(8-70) 5e-06 33.8% 2dloA(11-80) 9e-14 44.29% 3ixeB(12-65) 5e-10 37.04% 1x61A(5-72) 3e-08 30.26% 1up8A(87-196) 2e-07 21.62% PF00412 5.1e-09 40.6% PF00412 7.6e-09 40.0% PF00412 3e-07 34.7% 1x64A1(1-45) 3e-07 21.15% 1b8tA2(2-62) 8e-07 10.94% g.39.1 0.00034 10.7% g.39.1 1.4e-12 41.1% g.39.1 1.9e-18 59.9%

Sequence

MDKYDDLGLEASKFIEDLNMYEASKDGLFRVDKGASNNPEFEETRRVFATKMAKIHLQQQ
QQQQLLQEEALPRAGRSPINGGNRQGVSSKLAADGAAKPPLAVPTVAPGLATTTMAVQSS
YPPQEQRTRPSAHGARPGSQNCGSREGPVSSQRPALHGLGPCEDPSCLTHGDYYDNFSLA
SPQWGDKPEESPSMSLSVGSGWPGCPGNDSLSHRSCGDSHPYHPQLSMCSGRSFESGQDS
GIGGHSSEKPTGLWSTASSQRVNLGFSSTGLENGTPAQPKGTTVSAPMVPSSTSQGACLR
RDSSLGYEAPGRVFKPLVDTQPWLQDGPKSYLSVSAPLSSTTSKDNAQTGMTAGLDPKLG
CVESGTSPKPSPTSNVHPVMSAPSELSCKESPPSWSTDSSLGPVLPESPTPSRVRLPCQT
LTPGPELGPSTAELKLEALTQRLEREMDAHPKADYFGACVKCSKGVFGAGQACQAMGDLY
HDACFTCAACSRKLRGKAFYFVNGKVFCEEDFLYSGFQQSADRCFLCGHLIMDMILQALG
KSYHPGCFRCVICNECLDGVPFTVDSENKIYCVRDYHKVLAPKCAACGLPILPPEGSDET
IRVVSMDRDYHVECYHCEDCGLELNDEDGHRCYPLEDHLFCHSCHVKRLEKGPSPASLHQ
HHF

Region:1-663
Length:663aa
Label:Full sequence
Reset:click