Input sequence

Protein name Sodium channel protein type 2 subunit alpha
Organism Mus musculus Length 2006
Disorder content 24.0% ProS content 18.9%
IDEAL NA UniProt B1AWN6

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil TMHMM:TMhelix 0 2006 1-4 5-27 28-52 53-477 478-489 490-525 526-717 718-990 991-1001 1002-1014 1015-1020 1021-1026 1027-1166 1167-1875 1876-1892 1893-1931 1932-2006 5-27 53-477 490-525 718-990 1002-1014 1021-1026 1167-1875 1893-1931 1-4 28-52 478-489 526-717 991-1001 1015-1020 1027-1166 1876-1892 1932-2006 1-4 28-42 49-52 478-489 526-533 540-559 567-628 637-661 668-677 690-717 999-1001 1015-1020 1027-1031 1049-1120 1132-1152 1876-1892 1932-1962 1970-2006 1789-1930 1487-1507 157-177 1781-1933 1487-1507 157-177 1247-1473 158-281 1567-1728 794-971 353-424 525-711 1000-1219 157-424 794-983 996-1219 1245-1473 1566-1776 1527-1616 756-841 1205-1290 171-271 1580-1657 113-433 698-1035 1079-1482 1516-1804 433-448 450-471 484-520 847-859 887-899 972-994 1121-1134 1151-1170 1305-1320 1629-1641 1751-1769 1967-1975 1981-2000 425-477 490-525 126-148 191-213 220-242 252-274 403-425 756-778 791-813 878-900 961-983 1209-1228 1249-1271 1281-1303 1330-1352 1452-1474 1533-1552 1562-1584 1591-1613 1664-1686 1754-1776 4jpzB(1-142) 4e-74 97.89% 1byyA(1-21) 8e-05 100.0% 1qg9A(1-21) 0.0002 100.0% 4dckA(1-153) 1e-51 77.78% 1byyA(1-21) 5e-06 100.0% 1qg9A(1-21) 0.0002 100.0% PF00520(3-198) 6e-35 41.41% PF00520(2-126) 2e-20 40.0% PF00520(2-171) 4e-18 39.31% PF00520(1-186) 5e-13 37.43% PF00520(128-198) 6e-11 44.44% PF11933(40-219) 4e-26 42.64% PF06512(3-219) 1e-25 39.56% PF00520 8e-71 245.9% PF00520 2e-62 218.0% PF06512 2e-129 440.5% PF00520 2.6e-71 247.5% PF00520 6e-67 233.0% 1orsC(1-91) 2e-19 9.89% 1orsC(2-87) 2e-13 11.49% 1orsC(2-85) 2e-10 12.79% 2e9xC1(1-103) 7e-13 12.39% 2e9xC1(1-82) 3e-06 13.41% f.14.1 1.8e-29 102.3% f.14.1 1.6e-32 112.9% f.14.1 1.2e-41 144.7% f.14.1 7.6e-38 131.5%

Sequence

MAQSVLVPPGPDSFRFFTRESLAAIEQRIAEEKAKRPKQERKDEDDENGPKPNSDLEAGK
SLPFIYGDIPPEMVSEPLEDLDPYYINKKTFIVLNKGKAISRFSATSALYILTPFNPIRK
LAIKILVHSLFNVLIMCTILTNCVFMTMSNPPDWTKNVEYTFTGIYTFESLIKILARGFC
LEDFTFLRDPWNWLDFTVITFAYVTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPDNSTFEINITSFFNNSL
DWNGTAFNRTMNMFNWDEYIEDKSHFYFLEGQNDALLCGNSSDAGQCPEGYICVKAGRNP
NYGYTSFDTFSWAFLSLFRLMTQDFWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLINLI
LAVVAMAYEEQNQATLEEAEQKEAEFQQMLEQLKKQQEEAQAAAAAASAESRDFSGAGGI
GVFSESSSVASKLSSKSEKELKNRRKKKKQKEQAGEEEKEDAVRKSASEDSIRKKGFRFS
LEGSRLTYEKRFSSPHQSLLSIRGSLFSPRRNSRASLFSFKGRVKDIGSENDFADDEHST
FEDNDSRRDSLFVPHRHGERRPSNVSQASRASRGIPTLPMNGKMHSAVDCNGVVSLVGGP
SALTSPVGQLLPEGTTTETEIRKRRSSSYHVSMDLLEDPTSRQRAMSMASILTNTMEELE
ESRQKCPPCWYKFANMCLIWDCCKPWLKVKHVVNLVVMDPFVDLAITICIVLNTLFMAME
HYPMTEQFSSVLSVGNLVFTGIFTAEMFLKIIAMDPYYYFQEGWNIFDGFIVSLSLMELG
LANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVG
MQLFGKSYKECVCKISNDCELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQTMC
LTVFMMVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAVGRMQKGIDFVKR
KIREFIQKAFVRKQKALDEIKPLEDLNNKKDSCISNHTTIEIGKDLNYLKDGNGTTSGIG
SSVEKYVVDESDYMSFINNPSLTVTVPIAVGESDFENLNTEEFSSESDMEESKEKLNATS
SSEGSTVDIGAPAEGEQPEAEPEESLEPEACFTEDCVRKFKCCQISIEEGKGKLWWNLRK
TCYKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFTYIFILEMLL
KWVAYGFQMYFTNAWCWLDFLIVDVSLVSLTANALGYSELGAIKSLRTLRALRPLRALSR
FEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCINYTTGEMFDVSV
VNNYSECQALIESNQTARWKNVKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDSRNVEL
QPKYEDNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYN
AMKKLGSKKPQKPIPRPANKFQGMVFDFVTKQVFDISIMILICLNMVTMMVETDDQSQEM
TNILYWINLVFIVLFTGECVLKLISLRHYYFTIGWNIFDFVVVILSIVGMFLAELIEKYF
VSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGM
SNFAYVKREVGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSGPPDCDPEKDHPG
SSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSEDDFEMFY
EVWEKFDPDATQFIEFCKLSDFAAALDPPLLIAKPNKVQLIAMDLPMVSGDRIHCLDILF
AFTKRVLGESGEMDALRIQMEERFMASNPSKVSYEPITTTLKRKQEEVSAIVIQRAYRRY
LLKQKVKKVSSIYKKDKGKEDEGTPIKEDIITDKLNENSTPEKTDVTPSTTSPPSYDSVT
KPEKEKFEKDKSEKEDKGKDIRESKK

Region:1-2006
Length:2006aa
Label:Full sequence
Reset:click