Input sequence

Protein name Collagen alpha-5(VI) chain
Organism Homo sapiens Length 2615
Disorder content 11.8% ProS content 11.8%
IDEAL NA UniProt A8TX70

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil 0 2615 1-22 23-221 222-227 228-329 330-333 334-534 535-539 540-1406 1407-1428 1429-1489 1490-1509 1510-1515 1516-1750 1751-2611 2612-2615 23-221 228-329 334-534 540-1406 1429-1489 1510-1515 1751-2611 1-22 222-227 1407-1428 1490-1509 1516-1750 2612-2615 1-22 222-227 1407-1428 1490-1509 1516-1750 2612-2615 624-1000 232-617 30-204 999-1172 439-618 1002-1183 1962-2139 626-804 813-993 2290-2465 29-211 235-423 1750-1819 1393-1504 1479-1593 1645-1730 442-590 628-775 814-965 1005-1167 30-202 236-409 442-612 628-797 814-987 1005-1178 1395-1454 1455-1514 1534-1593 1597-1656 1659-1718 1758-1935 1963-2139 2291-2483 438-617 804-999 615-807 2290-2499 1957-2171 995-1184 29-209 1746-1885 228-413 1416-1725 23-214 229-415 440-620 621-802 807-999 1003-1186 1191-1387 1751-1947 1957-2163 2284-2499 139-154 1452-1476 1509-1522 1546-1564 1594-1612 1621-1642 1679-1695 1822-1835 2598-2609 2584-2611 4cn9A(6-395) 6e-27 27.96% 4cn9A(6-387) 1e-21 26.52% 4igiA(3-177) 1e-10 27.84% 4nehA(126-306) 8e-10 27.03% 1n3yA(1-188) 7e-45 23.4% 1n3yA(1-187) 8e-23 17.99% 1n3yA(3-169) 3e-13 16.94% 1lfaA(2-182) 1e-44 23.5% 1lfaA(3-181) 2e-33 21.08% 1lfaA(3-158) 1e-16 16.85% 4igiA(2-184) 2e-20 26.63% 4igiA(2-189) 5e-20 25.79% 4cn9A(3-74) 9e-05 15.07% 2pneA(1-80) 1e-12 30.36% 2pneA(3-78) 6e-11 26.09% 2pneA(3-78) 8e-08 31.03% PF00092(1-148) 1e-09 33.33% PF00092(1-148) 1e-08 29.61% PF00092(1-148) 5e-06 30.97% PF00092(1-161) 7e-06 25.3% PF00092 6e-34 123.4% PF00092 1.3e-31 115.6% PF00092 1.6e-51 181.8% PF00092 1.6e-54 191.8% PF00092 4.3e-49 173.7% PF00092 1.2e-29 109.1% PF01391 2.3e-10 45.1% PF01391 9.3e-12 49.7% PF01391 3.7e-07 34.4% PF01391 1.1e-09 42.8% PF01391 1.4e-10 45.8% PF00092 1.1e-12 52.7% PF00092 8.5e-20 76.4% PF00092 4.5e-26 97.2% 1ao3A(2-187) 3e-30 22.58% 1auqA(7-205) 2e-29 17.33% 1auqA(4-203) 1e-28 17.91% 1auqA(16-205) 2e-18 14.22% 1auqA(11-207) 1e-17 12.44% 1auqA(7-199) 2e-15 15.66% 1auqA(16-200) 5e-14 19.46% 1auqA(5-138) 1e-06 19.29% 1aoxA(1-194) 7e-16 20.1% 1af0A1(2-221) 2e-16 10.93% c.62.1 3.6e-40 135.5% c.62.1 4.4e-40 133.0% c.62.1 4.9e-51 167.4% c.62.1 8.4e-54 181.4% c.62.1 1.2e-49 167.4% c.62.1 4.5e-38 124.9% c.62.1 3e-14 47.3% c.62.1 3.5e-31 105.2% c.62.1 1.8e-33 108.2% c.62.1 3.2e-39 132.3%

Sequence

MKILLIIFVLIIWTETLADQSPGPGPVYADVVFLVDSSDHLGPKSFPFVKTFINKMINSL
PIEANKYRVALAQYSDEFHSEFHLSTFKGRSPMLNHLKKNFQFIGGSLQIGKALQEAHRT
YFSAPINGRDRKQFPPILVVLASAESEDEVEEASKALQKDGVKIISVGVQKASEENLKAM
ATSHFHFNLRTIRDLSTFSQNMTQIIKDVTKYKEGAVDADMQVHFPISCQKDSLADLVFL
VDESLGTGGNLRHLQTFLENITSSMDVKENCMRLGLMSYSNSAKTISFLKSSTTQSEFQQ
QIKNLSIQVGKSNTGAAIDQMRRDGFSESYGSRRAQGVPQIAVLVTHRPSDDEVHDAALN
LRLEDVNVFALSIQGANNTQLEEIVSYPPEQTISTLKSYADLETYSTKFLKKLQNEIWSQ
ISTYAEQRNLDKTGCVDTKEADIHFLIDGSSSIQEKQFEQIKRFMLEVTEMFSIGPDKVR
VGVVQYSDDTEVEFYITDYSNDIDLRKAIFNIKQLTGGTYTGKALDYILQIIKNGMKDRM
SKVPCYLIVLTDGMSTDRVVEPAKRLRAEQITVHAVGIGAANKIELQEIAGKEERVSFGQ
NFDALKSIKNEVVREICAEKGCEDMKADIMFLVDSSWSIGNENFRKMKIFMKNLLTKIQI
GADKTQIGVVQFSDKTKEEFQLNRYFTQQEISDAIDRMSLINEGTLTGKALNFVGQYFTH
SKGARLGAKKFLILITDGVAQDDVRDPARILRGKDVTIFSVGVYNANRSQLEEISGDSSL
VFHVENFDHLKALERKLIFRVCALHDCKRITLLDVVFVLDHSGSIKKQYQDHMINLTIHL
VKKADVGRDRVQFGALKYSDQPNILFYLNTYSNRSAIIENLRKRRDTGGNTYTAKALKHA
NALFTEEHGSRIKQNVKQMLIVITDGESHDHDQLNDTALELRNKGITIFAVGVGKANQKE
LEGMAGNKNNTIYVDNFDKLKDVFTLVQERMCTEAPEVCHLQEADVIFLCDGSDRVSNSD
FVTMTTFLSDLIDNFDIQSQRMKIGMAQFGSNYQSIIELKNSLTKTQWKTQIQNVSKSGG
FPRIDFALKKVSNMFNLHAGGRRNAGVPQTLVVITSGDPRYDVADAVKTLKDLGICVLVL
GIGDVYKEHLLPITGNSEKIITFQDFDKLKNVDVKKRIIREICQSCGKTNCFMDIVVGFD
ISTHVQGQPLFQGHPQLESYLPGILEDISSIKGVSCGAGTEAQVSLAFKVNSDQGFPAKF
QIYQKAVFDSLLQVNVSGPTHLNAQFLRSLWDTFKDKSASRGQVLLIFSDGLQSESNIML
ENQSDRLREAGLDALLVVSLNTTAHHEFSSFEFGKRFDYRTHLTIGMRELGKKLSQYLGN
IAERTCCCTFCKCPGIPGPHGTRGLQAMKGSQGLKGSRGHRGEDGNPGVRGDTGPQGDKG
IAGCPGAWGQKGLKGFSGPKGGHGDDGIDGLDGEEGCHGFPGIKGEKGDPGSQGSPGSRG
APGQYGEKGFPGDPGNPGQNNNIKGQKGSKGEQGRQGRSGQKGVQGSPSSRGSRGREGQR
GLRGVSGEPGNPGPTGTLGAEGLQGPQGSQGNPGRKGEKGSQGQKGPQGSPGLMGAKGST
GRPGLLGKKGEPGLPGDLGPVGQTGQRGRQGDSGIPGYGQMGRKGVKGPRGFPGDAGQKG
DIGNPGIPGGPGPKGFRGLALTVGLKGEEGSRGLPGPPGQRGIKGMAGQPVYSQCDLIRF
LREHSPCWKEKCPAYPTELVFALDNSYDVTEESFNKTRDIITSIVNDLNIRENNCPVGAR
VAMVSYNSGTSYLIRWSDYNRKKQLLQQLSQIKYQDTTEPRDVGNAMRFVTRNVFKRTYA
GANVRRVAVFFSNGQTASRSSIITATMEFSALDISPTVFAFDERVFLEAFGFDNTGTFQV
IPVPPNGENQTLERLRRCALCYDKCFPNACIREAFLPEDSYMDVVFLIDNSRNIAKDEFK
AVKALVSSVIDNFNIASDPLISDSGDRIALLSYSPWESSRRKMGTVKTEFDFITYDNQLL
MKNHIQTSFQQLNGEATIGRALLWTTENLFPETPYLRKHKVIFVVSAGENYERKEFVKMM
ALRAKCQGYVIFVISLGSTRKDDMEELASYPLDQHLIQLGRIHKPDLNYIAKFLKPFLYS
VRRGFNQYPPPMLEDACRLINLGGENIQNDGFQFVTELQEDFLGGNGFIGQELNSGRESP
FVKTEDNGSDYLVYLPSQMFEPQKLMINYEKDQKSAEIASLTSGHENYGRKEEPDHTYEP
GDVSLQEYYMDVAFLIDASQRVGSDEFKEVKAFITSVLDYFHIAPTPLTSTLGDRVAVLS
YSPPGYMPNTEECPVYLEFDLVTYNSIHQMKHHLQDSQQLNGDVFIGHALQWTIDNVFVG
TPNLRKNKVIFVISAGETNSLDKDVLRNVSLRAKCQGYSIFVFSFGPKHNDKELEELASH
PLDHHLVQLGRTHKPDWNYIIKFVKPFVHLIRRAINKYPTEDMKATCVNMTSPNPENGGT
ENTVLLLPGIYEIKTENGDLFDEFDSQAQHLLVLGNNHSSGSETATDLMQKLYLLFSTEK
LAMKDKEKAHLEEISALVVDKQQEKEDKEMEATDI

Region:1-2615
Length:2615aa
Label:Full sequence
Reset:click