Input sequence

Protein name Transcription elongation factor SPT6 homolog
Organism Arabidopsis thaliana Length 1647
Disorder content 26.1% ProS content 11.4%
IDEAL NA UniProt A8MS85

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil 0 1647 1-53 54-84 85-216 217-234 235-240 241-980 981-985 986-1211 1212-1216 1217-1413 1414-1647 54-84 217-234 241-980 986-1211 1217-1413 1-53 85-216 235-240 1212-1216 1414-1647 1-8 21-26 43-53 85-104 110-118 138-150 161-172 181-194 206-216 1216-1216 1437-1443 1450-1454 1466-1476 1482-1488 1518-1525 1571-1578 1593-1603 1614-1619 1628-1647 247-1096 1221-1371 247-1124 1216-1408 430-698 989-1077 734-870 1102-1177 1330-1411 907-975 1101-1189 1220-1329 1360-1411 8-21 26-49 55-93 103-117 151-180 382-394 1437-1476 1486-1497 1506-1554 1557-1608 1610-1632 54-84 3psfA(1-796) 6e-46 23.68% 3pjpA(1-146) 5e-18 32.45% 3psfA(1-823) 2e-142 21.64% 2xp1A(4-175) 9e-47 26.42% 2oceA3(92-322) 1e-32 18.45% 2oceA2(2-71) 2e-08 22.47% 2oceA5(22-140) 7e-06 19.71% 2ba0A1(5-78) 2e-05 17.11% 2pldA(13-89) 0.0003 10.98% 3ci0K2(28-105) 0.0004 5.13% b.40.4 4.9e-08 26.3% d.93.1 3e-05 18.2% d.93.1 0.00019 15.5%

Sequence

MARNAISDDEEDHELEDDDGEPVHGDPAEHDENDDEEDDDDVGNEYENDGFIVNDEDEEE
EEEEDEERKDSDEERQKKKKKRKKKDEGLDEDDYLLLQDNNVKFKKRQYKRLKKAQREQG
NGQGESSDDEFDSRGGTRRSAEDKIKDRLFDDVDVDDPPDDVGDEEDLVVEEDVVGSEDE
MADFIVDEDDEHGPPKRGNSKKKKYRQGSDITAMRDANEIFGDVDELLTIRKKGLASNQR
MERRLEDEFEPTVLSEKYMTGNDDEIRQLDIPERMQISEESTGSPPVDEISIEEESNWIY
AQLASQLRESDGTFDGRGFSVNKDDIAKFLELHHVQKLEIPFIAMYRKEQCRSLLDTGDF
DGANQGKKPETKWHKVFWMIHDLDKKWLLLRKRKMALHGYYTKRYEEESRRVYDETRLNL
NQYLFESVIKSLKVAETEREVDDVDSKFNLHFPPGEIGVDEGQYKRPKRKSQYSICSKAG
LWEVANKFGYSAEQLGLALSLEKLVDELEDAKETPEEMAKNFVCAMFENSLAVLKGARHM
AAVEISCEPSVKKYVRGIYMENAVVSTSPTADGNTVIDSFHQFSGIKWLREKPLSKFEGA
QWLLIQKGEEEKLLQVTFKLPENYMNRLISDCNEHYLSVGVSKYAQLWNEQRKLILEDAL
HAFLLPSMEKEARSLLTSRAKSRLLSEYGQALWNKVSAGPYQKKEMDINLDEEAAPRVMA
CCWGPGKPPNTFVMLDSSGEVLDVLYAGSLTSRSQNVNDQQRKKSDQDRVLKFMMDHQPH
VVALGAVNLSCTRLKDDIYEVIFQMVEEKPRDVGHGMDDLSIVYVDESLPRLYENSRISG
EQLPQQSGNVRRAVALGRYLQNPLAMVATLCGPGREILSWKLHPLENFLQLDEKYGMVEQ
VMVDITNQVGIDINLAASHDWFFSPLQFISGLGPRKAASLQRSLVRAGSIFVRKDLIMHG
LGKKVFVNAAGFLRIRRSGLAASSSQFIDLLDDTRIHPESYSLAQELAKDIYDEDVRGDS
NDDEDAIEMAIEHVRDRPASLRKVVLDEYLASKKRENKKETYSNIIRELSCGFQDWRIPF
KEPSPDEEFYMISGETEDTIAEGRIVQASVRRLQNGRAICVLDSGLTGMLMKEDFSDDGR
DIVDLADQLKEGDILTCKIKSIQKQRYQVFLICKESEMRNNRHQHNQNVDAYYHEDRNSL
QLVKEKARKEKELVRKHFKSRMIVHPRFQNITADQATEYLSDKDFGESIVRPSSRGLNFL
TLTLKIYDGVYAHKEIAEGGKENKDITSLQCIGKTLTIGEDTFEDLDEVMDRYVDPLVSH
LKTMLNYRKFRKGTKSEVDDLLRIEKGENPSRIVYCFGISHEHPGTFILSYIRSTNPHHE
YIGLYPKGFKFRKRMFEDIDRLVAYFQRHIDDPLQESAPSIRSIAAKVPMRSPADHGSSG
GSGWGSSQSEGGWKGNSDRSGSGRGGEYRNGGGRDGHPSGAPRPYGGRGRGRGRGRRDDM
NSDRQDGNGDWGNNDTGTADGGWGNSGGGGWGSESAGKKTGGGSTGGWGSESGGNKSDGA
GSWGSGSGGGGSGGWGNDSGGKKSSEDGGFGSGSGGGGSDWGNESGGKKSSADGGWGSES
GGKKSDGEGGWGNEPSSRKSDGGGGGW

Region:1-1647
Length:1647aa
Label:Full sequence
Reset:click