Input sequence

Protein name Protocadherin-18
Organism Bos taurus Length 1134
Disorder content 39.2% ProS content 27.9%
IDEAL NA UniProt A7MB46

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR TMHMM:TMhelix 0 1134 1-21 22-359 360-365 366-683 684-697 698-720 721-727 728-732 733-1134 22-359 366-683 698-720 728-732 1-21 684-697 721-727 733-1134 1-21 697-697 721-727 733-745 752-771 787-793 800-816 836-895 912-934 939-951 965-971 978-1014 1021-1041 1049-1067 1081-1106 1111-1134 197-664 30-133 83-238 141-673 34-238 473-567 253-345 588-666 371-455 142-236 28-111 28-114 142-237 251-345 365-456 470-567 586-677 202-635 78-315 600-676 32-130 131-238 234-394 347-457 459-568 570-678 772-783 956-964 988-1009 698-720 3q2wA(59-528) 1e-25 27.0% 1wuzA(5-103) 2e-13 41.35% 3ppeA(52-203) 3e-06 26.71% 3q2wA(4-537) 9e-71 23.85% 2wcpA(20-206) 1e-24 25.6% PF00028(4-92) 1e-10 43.16% PF00028(3-92) 3e-07 33.33% PF00028(3-81) 9e-07 35.44% PF00028(7-91) 3e-05 37.65% PF00028(1-91) 0.0001 32.65% PF08266(1-81) 3e-10 35.71% PF08266 1.3e-08 30.4% PF00028 4.5e-15 60.7% PF00028 2e-20 78.5% PF00028 1.8e-13 55.4% PF00028 4.6e-16 64.0% PF00028 1.6e-06 32.2% 1dnvA(14-412) 1e-57 7.03% 2nlzA1(313-527) 1e-23 10.2% 1p32A(5-78) 4e-06 3.8% b.1.6 3.7e-06 23.8% b.1.6 1.6e-26 92.6% b.1.6 8.6e-32 109.8% b.1.6 4.3e-22 78.8% b.1.6 6.9e-28 97.2% b.1.6 3.3e-17 60.6%

Sequence

MYQMNAKMHFTFVFALLVVSFNLDVLGKNLKYRIYEEQRVGSVIARLSEDVADVLVKLPN
PSTVRFRAMQRGNTPLLVVNEDNGEISIGAKIDREQLCQKNLNCSIEFDVITLPTEHLQL
FHIEVEVLDINDNSPQFSRSLIPIEISESAAVGTRIPLDSAFDPDVGENSLHTYSLSAND
FFNIEVRTRTDGAKYAELIVVRELDRELKSSYELQLTASDMGVPQRSGSSILKISISDSN
DNSPAFEQQSYIIQLLENSPVGTLLLDLNATDPDEGANGKIVYSFSSHVSPKIIETFKID
SERGHLTLFKQVDYEITKSYEIDVQAQDLGPNSIPAHCKIIIKVVDVNDNKPEISINLMS
PGKEEISYIFEGDPIDTFVALVRVQDKDSGLNGEIVCKLHGHGHFKLQKTYENNYLILTN
ATLDREKRSEYSLTVIAEDKGTPSLSTVKHFTVQINDINDNPPHFQRSRYEFAISENNSP
GAYITTVTATDPDLGENGQVTYTILESFILGSSITTYDTIDPSNGAIYALRIFDHEEVSQ
ITFVVEARDGGSPKQLVSNTTVVLTIIDENDNVPVVIGPALRNNTAEISIPKGAESGFHV
TRIRAIDRDSGVNAELSCSIVAGNEENIFVIDPRSCDIHTNVSMESVPYTEWELSVVIQD
KGNPQLHTKVLLKCVIFEYAESVTSTAMTSVSQAPLDVSMIIIISLGAICAVLLVIMVLF
ATRCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTVNGTLPIRSHHRSSPS
SSPTLERGQMGSRQSHNSHQSLNSLVTISSNHVPENFSLELTHATPAVEVSQLLSMLHQG
QYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGEGF
SDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFPAQPQQQ
HPHQSLEDDVQPVDSGEKKKSFSTFGKDSPSEEDSGDTSTSSLLSEMSSVFQRLLPASLD
TYSECTEMDRSNSLERRKGPLPAKTVGYPQGVAAWAASTHFQNPTNNSGPPLGTHSSVQP
SSKWLPAMEEIPENYEEDDFDNVLNHLNDGKHELMDASELVAEINKLLQDVRQS

Region:1-1134
Length:1134aa
Label:Full sequence
Reset:click