Input sequence

Protein name Collagen alpha-4(VI) chain
Organism Mus musculus Length 2309
Disorder content 18.1% ProS content 17.0%
IDEAL NA UniProt A2AX52

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR 0 2309 1-18 19-524 525-528 529-615 616-624 625-830 831-839 840-1221 1222-1228 1229-1396 1397-1457 1458-1508 1509-1729 1730-1754 1755-1767 1768-1971 1972-1977 1978-2219 2220-2301 2302-2305 2306-2309 19-524 529-615 625-830 840-1221 1229-1396 1458-1508 1730-1754 1768-1971 1978-2219 2302-2305 1-18 616-624 831-839 1397-1457 1509-1729 1755-1767 2220-2301 2306-2309 1-18 616-624 831-839 1397-1457 1509-1729 1755-1767 2227-2253 2263-2276 2285-2301 2306-2309 847-1206 234-612 625-1025 429-816 34-204 1491-1579 1409-1516 1674-1744 846-1020 1027-1205 1981-2170 233-416 34-213 632-816 1768-1959 429-601 1491-1579 1674-1745 1415-1533 849-1005 235-385 1030-1176 34-182 430-582 1776-1896 1677-1738 1479-1534 1515-1583 34-206 235-409 430-599 634-811 849-1014 1030-1199 1417-1476 1477-1536 1559-1618 1619-1678 1684-1743 1776-1953 1982-2179 228-414 848-1019 429-580 630-816 1017-1205 1976-2197 1768-1959 34-212 1411-1592 1675-1744 27-212 228-415 424-610 627-817 847-1022 1023-1204 1209-1403 1769-1965 1975-2195 707-718 1342-1357 1378-1391 1444-1462 1594-1622 1625-1643 1649-1671 4cn9A(8-389) 1e-29 30.15% 4cn9A(9-392) 1e-24 27.32% 4cn9A(3-391) 1e-21 28.0% 4cn9A(9-387) 4e-19 24.69% 4igiA(3-173) 1e-17 32.37% 2pneA(2-81) 6e-05 35.96% 2pneA(1-79) 0.0002 32.11% 2pneA(11-79) 0.0006 38.03% 1n3yA(1-188) 3e-47 28.19% 1n3yA(1-188) 2e-44 19.68% 1n3yA(3-174) 4e-06 14.14% 1lfaA(2-182) 3e-43 21.62% 1lfaA(4-182) 8e-32 18.58% 1lfaA(2-180) 4e-23 19.46% 1ijbA(7-196) 6e-12 13.57% 4igiA(2-177) 3e-26 30.51% 2pneA(2-81) 8e-14 35.96% 2pneA(8-80) 1e-11 35.62% 2pneA(1-81) 1e-11 26.05% PF00092(1-159) 4e-15 33.54% PF00092(1-148) 1e-13 33.77% PF00092(1-147) 4e-10 31.33% PF00092(1-148) 1e-08 32.9% PF00092(1-149) 4e-06 25.0% PF00092(1-112) 0.001 26.45% PF01391(2-63) 3e-05 46.77% PF01391(5-60) 3e-05 48.21% PF01391(2-63) 8e-05 44.93% PF00092 4.4e-46 163.7% PF00092 2.1e-57 201.3% PF00092 1.8e-43 155.0% PF00092 1.9e-25 95.2% PF00092 1.3e-49 175.4% PF00092 1.9e-55 194.8% PF01391 8.6e-14 56.4% PF01391 1.7e-11 48.8% PF01391 2.4e-10 45.0% PF01391 1.7e-10 45.5% PF01391 2.5e-11 48.2% PF00092 2.4e-15 61.6% PF00092 6.3e-05 23.5% 1ao3A(1-187) 3e-31 24.61% 1ao3A(5-187) 5e-30 24.04% 1ao3A(5-154) 3e-19 23.53% 1ao3A(2-187) 8e-15 22.11% 1auqA(4-199) 4e-30 18.27% 1auqA(11-207) 6e-12 17.57% 1auqA(9-198) 1e-11 14.8% 1cqpA(4-181) 2e-23 20.33% 1af0A1(2-212) 3e-17 13.68% 1af0A1(152-221) 1e-08 10.0% c.62.1 9.2e-49 161.8% c.62.1 7.2e-56 185.4% c.62.1 3e-43 141.3% c.62.1 9e-42 138.6% c.62.1 7.6e-51 166.8% c.62.1 6.2e-54 181.9% c.62.1 1.1e-18 62.0% c.62.1 4.6e-32 108.2% c.62.1 9.2e-27 90.3%

Sequence

MGTWKTFWLIISLAAGLGFVKSQRIVCREASVGDIVFLVHNSINPQHAHSVRNFLYILAN
SLQVGRDNIRVGLAQYSDTPTSEFLLSVYHRKGDVLKHIRGLQFKPGGNRMGQALQFILE
HHFREGAGSRASQGVPQVAVVVSSGLTEDHIREPAEALRRAGILVYAIGVKDASQAELRE
ISSSPKDNFTFFVPNFPGLPGLAQKLRPELCSTLGKAAQYTERESPACSEASPADIVFLV
DSSTSIGLQNFQKVKHFLHSVVSGLDVRSDQVQVGLVQYSDNIYPAFPLKQSSLKSAVLD
RIRNLPYSMGGTSTGSALEFIRANSLTEMSGSRAKDGVPQIVVLVTDGESSDEVQDVADQ
LKRDGVFVFVVGINIQDVQELQKIANEPFEEFLFTTENFSILQALSGTLLQALCSTVERQ
MKKSTKTYADVVFLIDTSQGTSQASFQWMQNFISRIIGILEVGQDKYQIGLAQYSDQGHT
EFLFNTHKTRNEMVAHIHELLVFQGGSRKTGQGLRFLHRTFFQEAAGSRLLQGVPQYVVV
ITSGKSEDEVGEVAQILRKRGVDIVSVGLQDFDRAELEGIGPVVLVSDLQGEDRIRQLML
DVNMFIQGSPKPPRVMTDVAKDAVEECLVPVPADLVFLVEDFSSARQPNFQRVVHFLTTT
VHSLNIHPDTTRVSLVFYSEKPRLEFSLDMYQSAAQVLRHLDRLTFRARRGRAKAGAALD
FLRKEVFLPEKGSRPHRGVQQIAVVIIESPSLDNVSTPASYLRRAGVTIYAAGTQPASES
KDLEKIVTYPPWKHAIRLESFLQLSVVGNKLKKKLCPEMLSGMPPLMSFIPESTRQSTQE
GCESVEKADIYFLIDGSGSIKPNDFIEMKDFMKEVIKMFHIGPDRVRFGVVQYSDKIISQ
FFLTQYASMAGLSAAIDNIQQVGGGTTTGKALSKMVPVFQNTARIDVARYLIVITDGQST
DPVAEAAQGLRDIGVNIYAIGVRDANTTELEEIASKKMFFIYEFDSLKSIHQEVIRDICS
SENCKSQKADIIFLIDGSESIAPKDFEKMKDFMERMVNQSNIGADEIQIGLLQFSSNPQE
EFRLNRYSSKVDMCRAILSVQQMSDGTHTGKALNFTLPFFDSSRGGRPRVHQYLIVITDG
VSQDNVAPPAKALRDRNIIIFAIGVGNVQRAQLLEITNDQDKVFQEENFESLQSLEKEIL
SEVCSSQGCNIDLSVGVDTSTSSERAQQELRRLLPELMQQLAFLSNISCEAPGQMEPRFR
YVVPGSSDQPVFDSGFEKYSDETIQKFLVHQGSVNNRMDVDFLQSLGETAIHLSLAKVKV
LLVFTDGLDEDLERLRRTSEFLRSRGLSGLLLIGLGGAHKLEELQELEFGRGFAYRQPLS
SSLPSLPSVLLKQLDTIVERTCCNMYAKCYGDDGIRGEPGSRGEQGERGLDGLPGHPGEE
GDHGQRGPRGLPGLRGEEGCPGVRGPKGARGFSGEKGNPGEEGVGGLDGEQGDRGAAGPS
GEKGSSGSRGLTGLPGPAGPRGEPGLRGDPGDPGIDNLIQGPKGEKGRRGHQGSPGFHGP
LGEAGSVGPRGSLGRHGLPGLKGVLGETGELGSRGEPGHPGPQGPRGRQGPPGFFGQKGD
PGTQGNPGLPGPSGSKGPDGPRGLKGEVGPAGERGPRGQQGPRGQPGLFGPDGHGYPGRK
GRKGEPGFPGYPGVQGEDGNPGRGGEKGAKGIRGKRGNSGFPGLAGTPGDQGPPGKMGTK
GSKGLADRTPCEIVDFVRGNCPCSTGISRCPAFPTEVVFTLDMSNDVAPSDFERMRNILL
SLLMKLEMCESNCPTGARVAIVSYNTRTDYLVRLSDHRGKAALLQAVRKIPLERSSGSRN
LGATMRFVARHVFKRVRSGLLVRKVAVFFQAGRNYDTASVSTATLELHAADIATAVVTFT
EEHNLPEAGLVDGPNEFHLFTWETEGQQDVERLASCTLCYDKCRPALGCQLRAPGPQKLD
MDLVFLVDSSQGVSRDIYLGALRLVDSVLKDLEVAAQPGTSWHGARAALLTHTTPGFWPG
VDQAPVLEYFHLTSHGHRTEMQRQIREAASGLLQGGPALGHALEWTLENVLLTAVLPRRS
RVLYAIVASETSIWDREKLRTLSQEAKCKGIALFVLAVGPGVGAQELAELAKVASAPWEQ
HLLRLEGVSEAEVAYASRFTEAFLNLLNSGINQYPPPELVKECGGPNRGDTLLHFFTSAK
RFSRSQSGTSAAFANDSEALKSQGIFLGERKSRVASVALQEALGSHGKDRADTEDIDQET
PAKGRHLGPTHGPCPMGPEEGECLNYVLK

Region:1-2309
Length:2309aa
Label:Full sequence
Reset:click