Input sequence

Protein name Sodium channel protein type 3 subunit alpha
Organism Mus musculus Length 1947
Disorder content 23.4% ProS content 18.8%
IDEAL NA UniProt A2ASI5

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil TMHMM:TMhelix 0 1947 1-7 8-26 27-73 74-465 466-648 649-942 943-950 951-982 983-1115 1116-1822 1823-1829 1830-1877 1878-1947 8-26 74-465 649-942 951-982 1116-1822 1830-1877 1-7 27-73 466-648 943-950 983-1115 1823-1829 1878-1947 1-7 27-40 47-73 466-502 519-630 642-648 994-1069 1082-1101 1823-1829 1878-1883 1888-1910 1917-1947 1735-1876 1433-1453 156-176 1727-1879 1433-1453 156-176 1196-1419 157-321 1513-1663 745-922 352-423 951-1168 519-633 156-423 745-934 947-1168 1194-1419 1512-1722 1473-1562 707-792 1154-1240 170-270 1526-1603 115-432 678-964 1138-1428 1462-1750 23-40 432-469 473-498 500-509 798-810 838-850 923-945 1021-1032 1064-1086 1254-1269 1575-1587 1697-1715 1913-1921 1927-1943 424-465 125-147 192-214 221-243 247-269 402-424 707-729 742-764 829-851 912-934 1158-1177 1198-1220 1230-1252 1279-1301 1398-1420 1479-1498 1508-1530 1537-1559 1610-1632 1700-1722 4jpzB(1-142) 2e-70 92.96% 1byyA(1-21) 8e-05 100.0% 1qg9A(1-21) 0.0002 100.0% 4dckA(1-153) 9e-49 75.82% 1byyA(1-21) 5e-06 100.0% 1qg9A(1-21) 0.0002 100.0% PF00520(3-198) 5e-36 42.86% PF00520(2-166) 3e-21 35.67% PF00520(2-160) 6e-18 41.36% PF00520(1-186) 3e-14 38.5% PF00520(128-198) 8e-11 44.44% PF06512(3-219) 3e-23 40.71% PF11933(34-135) 2e-14 42.61% PF00520 5.3e-73 253.1% PF00520 4.9e-63 220.0% PF06512 5e-123 419.3% PF00520 3e-73 253.9% PF00520 3.1e-64 224.0% 1orsC(1-91) 6e-19 7.69% 1orsC(2-87) 9e-14 10.34% 1orsC(2-86) 2e-10 12.64% 2e9xC1(1-103) 1e-13 12.39% 2e9xC1(1-82) 2e-06 14.63% f.14.1 2.2e-30 105.6% f.14.1 1.1e-31 110.0% f.14.1 2.8e-38 133.0% f.14.1 1e-35 124.1%

Sequence

MAQALLVPPGPESFRLFTRESLAAIEKRAAEEKAKKPKKEQDIDDENKPKPNSDLEAGKN
LPFIYGDIPPEMVSEPLEDLDPYYVSKKTFVVLNKGKAIFRFSATSALYILTPLNPVRKI
AIKILVHSLFSMLIMCTILTNCVFMTLSNPPDWTKNVEYTFTGIYTFESLIKILARGFCL
EDFTFLRDPWNWLDFSVIVMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGAL
IQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRNKCLQWPPSDSAFEINTTSYFNGTMD
SNGTFVNVTMSTFNWKDYIADDSHFYVLDGQKDPLLCGNGSDAGQCPEGYICVKAGRNPN
YGYTSFDTFSWAFLSLFRLMTQDYWENLYQLTLRAAGKTYMIFFVLVIFLGSFYLVNLIL
AVVAMAYEEQNQATLEEAEQKEAEFQQMLEQLKKQQEEAQAVAAASAASRDFSGIGGLGE
LLESSSEASKLSSKSAKEWRNRRKKRRQREHLEGNHRPEGDRFPKSESEDSVKRRSFLFS
LDGNPLSGDKKLCSPHQSLLSIRGSLFSPRRNSKTSIFSFRGRAKDVGSENDFADDEHST
FEDSESRRDSLFVPHRPGERRNSNGTTTETEVRKRRLSSYQISMEMLEDSSGRQRAMSIA
SILTNTMEELEESRQKCPPCWYRFANVFLIWDCCDSWLKVKHLVNLIVMDPFVDLAITIC
IVLNTLFMAMEHYPMTEQFSSVLTVGNLVFTGIFTAEMVLKIIAMDPYYYFQEGWNIFDG
IIVSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVL
AIIVFIFAVVGMQLFGKSYKECVCKINEDCKLPRWHMNDFFHSFLIVFRVLCGEWIETMW
DCMEVAGQTMCLIVFMLVMVIGNLVVLNLFLALLLSSFSSDNLAATDDDNEMNNLQIAVG
RMQKGIDYVKNKIRECFRKAFFRKPKVIEIHEGNKIDSCMSNNTGVVEISKELNYLKDGN
GTTSGVGTGSSVEKYVIDENDYMSFINNPSLTVTVPIAVGESDFENLNTEEFSSESELEE
SKEKLNATSSSEGSTVDVAPPREGEQAEIEPEEDLKPEACFTEGCIKKFPFCQVSTEEGK
GKIWWNLRKTCYSIVEHNWFETFIVFMILLSSGALAFEDIYIEQRKTIKTMLEYADKVFT
YIFILEMLLKWVAYGFQTYFTNAWCWLDFLIVDVSLVSLVANALGYSELGAIKSLRTLRA
LRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYHCVNMT
TGSMFDMSEVNNFSDCQALGKQARWKNVKVNFDNVGAGYLALLQVATFKGWMDIMYAAVD
SRDVKLQPVYEENLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEE
QKKYYNAMKKLGSKKPQKPIPRPANKFQGMVFDFVTRQVFDISIMILICLNMVTMMVETD
DQSKYMTLVLSRINLVFIVLFTGEFLLKLISLRYYYFTIGWNIFDFVVVILSIVGMFLAE
LIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFI
YAIFGMSNFAYVKKEAGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNSAPPDCDP
DAIHPGSSVKGDCGNPSVGIFFFVSYIIISFLVVVNMYIAVILENFSVATEESAEPLSED
DFEMFYEVWEKFDPDATQFIEFCKLSDFAAALDPPLLIAKPNKVQLIAMDLPMVSGDRIH
CLDILFAFTKRVLGESGEMDALRIQMEDRFMASNPSKVSYEPITTTLKRKQEEVSAAIIQ
RNYRCYLLKQRLKNISNTYDKETIKGRIVLPIKGDMVIDKLNGNSTPEKTDGSSSTTSPP
SYDSVTKPDKEKFEKDKPEKESKGKEV

Region:1-1947
Length:1947aa
Label:Full sequence
Reset:click