Input sequence

Protein name CLIP-associating protein 1
Organism Xenopus tropicalis Length 1452
Disorder content 37.3% ProS content 9.8%
IDEAL NA UniProt A1A5G0

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam RPS-BLAST:Pfam RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP HMMER:SCOP HMMER:SCOP SEG:LCR COILS:coiledCoil 0 1452 1-3 4-226 227-234 235-308 309-541 542-809 810-1032 1033-1212 1213-1435 1436-1452 4-226 309-541 810-1032 1213-1435 1-3 235-308 542-809 1033-1212 1436-1452 1-3 235-248 303-308 572-575 740-745 754-777 805-809 1033-1040 1078-1085 1102-1107 1119-1130 1151-1160 1176-1212 299-540 10-227 298-540 5-227 1218-1416 339-526 73-211 1233-1406 162-198 1373-1409 91-528 809-1405 1-548 320-1009 812-1422 253-267 550-570 606-621 639-661 668-682 775-794 1027-1046 1262-1266 1437-1452 1222-1249 4k92A(2-241) 9e-123 90.08% 4g3aA(7-218) 3e-34 38.18% 4k92A(1-241) 3e-74 89.3% 4g3aA(5-218) 3e-37 37.05% 1u6gC(5-205) 4e-09 20.19% PF12348(10-199) 3e-25 35.94% PF12348(63-204) 3e-18 38.46% PF12348(12-189) 0.0003 23.6% PF02985 3.2e-09 41.3% PF02985 2.7e-05 28.2% 2bkuB1(5-447) 4e-27 8.97% 1b3uA(12-585) 2e-23 9.12% a.118.1 8e-41 139.8% a.118.1 2.9e-33 111.9% a.118.1 2.8e-46 158.7%

Sequence

MEQGMDYWLGQIQQKDVGKRLQVGPDLMEYLSDRQKSIDLEQDQTVLDRMVDGLATSWVN
SSNYKVALLGMDILSALVTRLQDRFRSQIGTVLPSLMDRLGDAKDSVREQDQNLLIKIME
QASNPQYVWERMFSGFKHKNFRTREGVCLCLIATLNVYGAHSLTLSKIVPHICNLLGDPN
SQVRDAAINCLVEIYRHVGERVRADLSKKGLPQSRLNVIFTKFDEVQKSGTMILSSADKN
FDDEDSVDGNRPSSASSSASSKAPQAARRGVSLGTARRPGTSSAAPKPGGTAKEGAGGVD
EEDFIRGFEDVPTVQIYSSRDLEESLNKIREILSDDKHDWEQRISALKKIRSLLLAGAAE
YDTFFPQLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDHGAEAIMPTVFNLV
PNSAKIMATSGVVAIRLIIRQTHVPRLIPIITSNCTSKSVAVRRRCYEFLDLLLQEWQTH
SLERHVSVLAETIKKGIHDADSEARIVARKCYWGFHSHFSKEAEQLFHTLESSYQKALQS
HLKNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTVSRASTATSKSTPGSLQRSRS
DIDVNAATCAKSKATSGASAAPFSSVAALPPGSYASLGRIRTRRQSSGSTTSTASTPADT
RGRSRAKVVSQSQPGSRSSSPGKLLGSGYGGIASGPQRVPQMPSSEKRSKIPRSQGCSRE
TSPSRIGLDRFGISQPGRIPSAMRVLSSSTDLEAAVADALKKPVRRRYEPYGMYSDDDAN
SDASSACSERSYSSKNGGIPHYLRQTEDVAEVLNHCASSNWSERKEGLIGLQNLLKSQRT
LSRVELKRLCEIFTRMFADPHSKRVFSMFLETLVDFVIIHKDDLQDWLFILLTQLLKKMG
ADLLGSVQAKVQKALDVTRDSFPFDQQFNILMRFIVDQTQTPNLKVKVAILKYIESLARQ
MDPTDFVNSSETRLAVSRIITWTTEPKSSDVRKAAQVVLISLFELNTPEFTMLLGALPKT
FQDGATKLLHNHLKNSSNSSMGSPSNTIGRTPSRHSSSRASPLTSPTNCSHGGLSPSMLD
YDTENLNSDEIYSSLRGVTEAIEKFSFRSQVDLNEPVRREGKKESELGSCDVGIASPASD
LRGGTDMVEGGRMALDNKTSLLNTQPPRAFTGPRGREYNPYAYSDSINSYDKTALKEAVF
DDDMDQLRDVPIDHSDLVADLLKELSNHNERVEERKGALCELLKITREDSLAVWEEHFKT
ILLLLLETLGDKDHAIRALALRVLREILRNQPARFKNYAELTIMKTLEAHKDSHKEVVRA
AEEAASTLAGSIHPEQCIKVLCPIIQTADYPINLAAIKMQTKVIERISKESLHQILPDII
PGLLQGYDNTESSVRKASVFCLVAIYSVIGEELKPYLAQLTGGKMKLLNLYIKRAQTTNS
NSSSSSDVSTHS

Region:1-1452
Length:1452aa
Label:Full sequence
Reset:click