Input sequence

Protein name Collagen alpha-1(XXVII) chain B
Organism Danio rerio Length 1658
Disorder content 75.8% ProS content 71.7%
IDEAL NA UniProt A0MSJ1

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam HMMER:Pfam RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP RPS-BLAST:SCOP HMMER:SCOP SEG:LCR 0 1658 1-35 36-38 39-235 236-1457 1458-1658 39-235 1458-1658 1-35 236-1457 1-35 248-253 258-264 276-292 312-329 336-1405 1411-1428 1440-1457 1477-1658 924-1003 1259-1337 569-616 1477-1658 949-1032 1259-1337 891-972 524-620 1474-1657 425-483 493-552 556-615 622-681 685-744 748-807 811-870 877-936 946-1005 1006-1065 1078-1137 1139-1198 1199-1258 1268-1327 1361-1420 1474-1657 1444-1599 89-223 785-1003 919-1190 1262-1337 18-231 77-86 237-251 291-307 422-482 490-515 556-568 621-638 645-667 678-713 727-749 769-784 837-853 874-890 1036-1057 1111-1139 1192-1209 1214-1235 1240-1257 1340-1355 1400-1415 4ae2A(1-212) 2e-22 31.92% 2pneA(2-79) 3e-07 41.25% 2pneA(3-79) 1e-05 41.25% 2pneA(4-51) 0.001 45.83% 4ae2A(1-212) 1e-30 30.66% 2pneA(3-81) 4e-07 39.29% 2pneA(3-79) 3e-06 39.24% 2pneA(2-81) 8e-06 36.59% 2pneA(1-80) 5e-05 30.93% PF01410(1-209) 2e-27 35.24% PF01391 2e-08 38.6% PF01391 3.7e-13 54.3% PF01391 9.4e-12 49.7% PF01391 2.2e-14 58.4% PF01391 8.3e-10 43.2% PF01391 2e-09 41.9% PF01391 2.4e-14 58.3% PF01391 3.6e-13 54.4% PF01391 1.2e-13 56.0% PF01391 1.5e-08 39.0% PF01391 1.3e-10 45.9% PF01391 1.7e-12 52.1% PF01391 3.4e-09 41.2% PF01391 1.9e-12 51.9% PF01391 6.9e-11 46.8% PF01410 3.1e-25 94.4% 1j83A(1-176) 5e-18 8.11% 1c4rA(28-164) 2e-09 10.79% 1af0A1(3-221) 4e-08 14.55% 1af0A1(2-221) 0.0002 9.16% 1af0A1(146-221) 0.0005 9.21% b.29.1 3.5e-15 46.9%

Sequence

MEPDNTPSSRLRAAGVGGRAVFFCMVLYCTCCLRLAQAQSADVDVLQRLGLVGKRPPQGF
IPIKSGVILTTRARIDVPVSSVIPVSLGSTFSIILSVCSHRINNAFLFTIVTKRKRLHLG
VQFIPGQILVYLGQNSSVNFDYNVHNGQWHNLALEIQGQKVTLYTSCGNTSIQANLDFQN
EETLDSEGSFRLGKMSQNSVQFEGAICQFDIHPSAQAAHNYCKYIKKQCREADTYRPNLP
PLLPLLPLDPNRSTIQTPKVVTDINERHLSLTRDKMNINHEGQTTVPPMITQPTLQLPLQ
TTAQTTASIRNRTSQISPKPTQQNRKKAKKERNKLHILKEHQISVTDSPTSQQQNQVDIP
TTTTPELSSTFRVSEMTTLAAQRPLPKETSFFEAKATFFESVTPAAMDGLQTFDLEPTQY
SLLELTGLKGEPGLPGPPGPPGQPGLPGKRGPRGPSGPHGKPGPPGTPGPKGKKGNPGIS
PGRAPSGIKGDPGLVGLPGQPGQPGRKGQKGHPGPSGHPGDQGIRGPDGSPGAKGYPGRQ
GLPGPIGNMGPKGVRGFIGIPGIFGLPGADGERGLPGVPGKKGKMGRPGFPGDFGERGPP
GPDGNPGEIGAPGPVGIPGFIGDMGPVGMVGPPGLIGPKGVPGNPGEPGLKGDKGELGLP
GEPGEPGFQGDKGIQGSPGLPGVQGKPGPQGKIGDRGPDGLPGPLGPEGFPGDIGPPGQN
GVEGPKGNAGVRGIPGPGGLPGLEGDQGPVGPAGAPGLEGRPGRKGISGNPGEEGMKGEP
GMTGNPGMLGERGPVGFVGPFGEMGLAGEKGDRGETGQPGPPGEKGAMGHPGAPGERGLS
GPAGAPGPHGSRGLSGTRGPKGTRGARGPDGPVGEKGMMGMKGPEGPPGKQGLSGQMGKI
GETGEAGPTGFTGVQGPTGPPGAKGILGEPGPQGSPGVLGPLGEIGAIGLPGKAGDQGLP
GEPGEKGAVGSPGNIGEQGLIGPRGDPGVDGEAGPSGPDGAKGEQGDVGLEGESGEKGVI
GFKGTEGRTGDPGLIGVKGPEGKPGKIGERGKPGEKGSKGHQGQLGEMGALGEQGDTGFI
GPKGSRGTTGFMGAPGKMGQQGEPGLVGYEGHQGPQGSLGSPGPKGEKGEQGDDGKVEGP
PGPSGDIGPVGNRGDRGEPGDPGYPGLEGVQGERGKEGAPGVPGNSGPRGFPGPKGSKGN
KGPKGKNSPRGESGNRGSPGPVGVPGPRGVIGREGFEGEPGLDGAAGKDGAKGMPGDLGR
DGDVGLPGKPGPQGNAGAPGLPGVQGSFGPKGERGITGHSGPPGKRGLNGGMGFPGKQGD
QGFKGQPGDAGEQGFPGVLGIFGPQGPPGDFGPVGIQGPKGPQGLMGMQGAIGPVGIIGP
SGNPGPQGDKGNKGEMGVQGPRGPPGPRGPPGPPGLPAVAFSHENEALGAALHVFDSRSA
LRSEMYQDTDLPLLDQGSEIFKTLHYLSILIHSIKNPLGTQENPARMCRDLLECEHRLND
GTYWIDPNLGCSSDNIEVTCSFTSGGQTCLKPVTASKLEIGVSLIQMNFIHLLSSEAVQI
ITVHCLNVSVWASEDSKTPSSSMVYFKAWDGQIIEAGGFIEPDLLKDECWITDGRWHQTQ
FIFRTQDPNLLPIVEIYNLPSTKPGSHYHLEVGPVCFL

Region:1-1658
Length:1658aa
Label:Full sequence
Reset:click