Input sequence

Protein name Cleavage and polyadenylation specificity factor subunit 1
Organism Danio rerio Length 1451
Disorder content 15.8% ProS content 7.2%
IDEAL NA UniProt A0A0R4IC37

Prediction

Order Disorder ProS BLAST:PDB BLAST:PDB BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:PDB RPS-BLAST:Pfam HMMER:Pfam SEG:LCR 0 1451 1-48 49-56 57-169 170-175 176-399 400-404 405-461 462-488 489-494 495-546 547-565 566-719 720-784 785-833 834-850 851-890 891-894 895-929 930-1063 1064-1068 1069-1325 1326-1336 1337-1340 1341-1451 1-48 57-169 176-399 462-488 495-546 566-719 785-833 851-890 930-1063 1069-1325 1341-1451 49-56 170-175 405-461 489-494 547-565 720-784 834-850 895-929 1064-1068 1326-1336 410-414 430-450 489-494 561-565 732-764 777-784 895-921 1128-1444 501-632 8-380 935-1444 444-685 2-381 1084-1416 1078-1385 382-395 406-425 766-776 912-921 2b5lA(822-1124) 4e-18 23.93% 2b5lA(374-479) 0.0005 22.56% 4a0aA(9-316) 2e-10 19.25% 2b5lA(634-1124) 3e-63 19.51% 2b5lA(317-534) 2e-14 16.33% 4a0aA(3-317) 7e-45 18.95% PF03178(4-304) 1e-46 35.42% PF03178 1.9e-141 480.5%

Sequence

MYAVYRQAHPPTAVEFAVYCNFISSQEKNLVVAGTSQLYVYRIIYDVESTSKSEKSSDGK
SRKEKLEQVASFSLFGNVMSMASVQLVGTNRDALLLSFKDAKLSVVEYDPGTHDLKTLSL
HYFEEPELRDGFVQNVHIPMVRVDPENRCAVMLVYGTCLVVLPFRKDTLADEQEGIVGEG
QKSSFLPSYIIDVRELDEKLLNIIDMKFLHGYYEPTLLILFEPNQTWPGRVAVRQDTCSI
VAISLNIMQKVHPVIWSLSNLPFDCNQVMAVPKPIGGVVVFAVNSLLYLNQSVPPFGVSL
NSLTNGTTAFPLRPQEEVKITLDCSQASFITSDKMVISLKGGEIYVLTLITDGMRSVRAF
HFDKAAASVLTTCMMTMEPGYLFLGSRLGNSLLLRYTEKLQETPMEEGKENEEKEKQEEP
PNKKKRVDSNWAGCPGKGNLPDELDEIEVYGSEAQSGTQLATYSFEVCDSILNIGPCASA
SMGEPAFLSEEFQTNPEPDLEVVVCSGYGKNGALSVLQKSIRPQVVTTFELPGCHDMWTV
IYCEEKPEKPSAEGDGESPEEEKREPTIEDDKKKHGFLILSREDSTMILQTGQEIMELDT
SGFATQGPTVYAGNIGDNKYIIQVSPMGIRLLEGVNQLHFIPVDLGSPIVHCSVADPYVV
IMTAEGVVTMFVLKNDSYMGKSHRLALQKPQIHTQSRVITLCAYRDVSGMFTTENKVSFL
AKEEIAIRTNSETETIIQDISNTVDDEEEMLYGESNPLTSPNKEESSRGSAAASSAHTGK
ESGSGRQEPSHWCLLVRENGVMEIYQLPDWRLVFLVKNFPVGQRVLVDSSASQSATQGEL
KKEEVTRQGDIPLVKEVALVSLGYNHSRPYLLAHVEQELLIYEAFPYDQQQAQSNLKVRF
KKMPHNINYREKKVKVRKDKKPEGQGEDTLGVKGRVARFRYFQDISGYSGVFICGPSPHW
MLVTSRGAMRLHPMTIDGAIESFSPFHNINCPKGFLYFNKQGELRISVLPTYLSYDAPWP
VRKIPLRCTVHYVSYHVESKVYAVCTSVKEPCTRIPRMTGEEKEFETIERDERYIHPQQD
KFSIQLISPVSWEAIPNTRVDLEEWEHVTCMKTVALKSQETVSGLKGYVALGTCLMQGEE
VTCRGRILILDVIEVVPEPGQPLTKNKFKVLYEKEQKGPVTALCHCSGFLVSAIGQKIFL
WSLKDNDLTGMAFIDTQLYIHQMYSIKNFILAADVMKSISLLRYQPESKTLSLVSRDAKP
LEVYSIEFMVDNNQLGFLVSDRDKNLMVYMYLPEAKESFGGMRLLRRADFNVGSHVNAFW
RMPCRGTLDTANKKALTWDNKHITWFATLDGGVGLLLPMQEKTYRRLLMLQNALTTMLPH
HAGLNPKAFRMLHCDRRTLQNAVKNILDGELLNKYLYLSTMERSELAKKIGTTPDIILDD
LLEIERVTAHF

Region:1-1451
Length:1451aa
Label:Full sequence
Reset:click